RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 PRSS56P0CW18 603 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 VCLP18206 1134 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 SSTR1P30872 391 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 CDKN1AP38936 164 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 CLDN17P56750 224 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 AKAP17AQ02040 695 aaKnown RBP4.97□□□□□ -1.61
CHD1-206ENST00000511067 UBXN1Q04323 297 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 CETN1Q12798 172 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 TRIM29Q14134 588 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 LRRC38Q5VT99 294 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 TMEM207Q6UWW9 146 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 CPEB2Q7Z5Q1 589 aaKnown RBP4.97□□□□□ -1.61
CHD1-206ENST00000511067 CARNMT1Q8N4J0 409 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 FAM89BQ8N5H3 189 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 OR2T11Q8NH01 316 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 RASL10BQ96S79 203 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 C17orf62Q9BQA9 187 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 MID1IP1Q9NPA3 183 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 TRPC4Q9UBN4 977 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 SLC12A6Q9UHW9 1150 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 PROCRQ9UNN8 238 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 HBS1LQ9Y450 684 aaKnown RBP4.97□□□□□ -1.61
CHD1-206ENST00000511067 STK36Q9NRP7 1315 aa4.97□□□□□ -1.61
CHD1-206ENST00000511067 A0A1W2PRV1 198 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 TRIM64A6NGJ6 449 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 TRIM64BA6NI03 449 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 TEX28O15482 410 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 EXTL3O43909 919 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 ZNF432O94892 652 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 PNPP00491 289 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 KIAA1024LP59773 190 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 RBM39Q14498 530 aaKnown RBP4.96□□□□□ -1.62
CHD1-206ENST00000511067 SLC39A12Q504Y0 691 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 PSRC1Q6PGN9 363 aaPredicted RBP4.96□□□□□ -1.62
CHD1-206ENST00000511067 TMEM270Q6UE05 265 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 FCRLAQ7L513 359 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 CCDC83Q8IWF9 413 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 LSMEM2Q8N112 164 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 LRTM2Q8N967 370 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 BCL2L2Q92843 193 aaPredicted RBP4.96□□□□□ -1.62
CHD1-206ENST00000511067 PDLIM5Q96HC4 596 aaKnown RBP4.96□□□□□ -1.62
CHD1-206ENST00000511067 RBM41Q96IZ5 413 aaKnown RBP4.96□□□□□ -1.62
CHD1-206ENST00000511067 CABS1Q96KC9 395 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 C10orf90Q96M02 699 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 NACAP1Q9BZK3 213 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 ZNF71Q9NQZ8 489 aaPredicted RBP4.96□□□□□ -1.62
CHD1-206ENST00000511067 PNPLA3Q9NST1 481 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 EXOC1Q9NV70 894 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 CWC25Q9NXE8 425 aaPredicted RBP4.96□□□□□ -1.62
CHD1-206ENST00000511067 SPG21Q9NZD8 308 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 GMEB2Q9UKD1 530 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 PRDM4Q9UKN5 801 aa4.96□□□□□ -1.62
CHD1-206ENST00000511067 ELF5Q9UKW6 265 aaPredicted RBP4.96□□□□□ -1.62
CHD1-206ENST00000511067 IGHV4-4A0A075B6R2 117 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 MSGN1A6NI15 193 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 DDX39AO00148 427 aaKnown RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 FPGTO14772 594 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 KINO60870 393 aaKnown RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 ATP9AO75110 1047 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 KHDRBS3O75525 346 aaKnown RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 TRMUO75648 421 aaKnown RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 RBMS1P29558 406 aaKnown RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 ALDH1B1P30837 517 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 DUTP33316 252 aaKnown RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 C17orf67Q0P5P2 114 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 SRSF9Q13242 221 aaKnown RBP eCLIP4.95□□□□□ -1.62
CHD1-206ENST00000511067 SGCGQ13326 291 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 PPA1Q15181 289 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 EXT1Q16394 746 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 CDC37Q16543 378 aaPredicted RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 LEKR1Q6ZMV7 388 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 NR2C2APQ86WQ0 139 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 CROCCP3Q8IVE0 287 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 AQP12AQ8IXF9 295 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 GBP7Q8N8V2 638 aaPredicted RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 KIAA0895Q8NCT3 520 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 LPCAT1Q8NF37 534 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 OR4C15Q8NGM1 316 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 OR10G8Q8NGN5 311 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 ZNRF4Q8WWF5 429 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 CDKN2AIPNLQ96HQ2 116 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 PANX3Q96QZ0 392 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 ALKBH7Q9BT30 221 aaPredicted RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 MRPL17Q9NRX2 175 aaKnown RBP4.95□□□□□ -1.62
CHD1-206ENST00000511067 STX8Q9UNK0 236 aa4.95□□□□□ -1.62
CHD1-206ENST00000511067 A0A087WUV0 522 aaPredicted RBP4.94□□□□□ -1.62
CHD1-206ENST00000511067 CDC123O75794 336 aaPredicted RBP4.94□□□□□ -1.62
CHD1-206ENST00000511067 SEC24AO95486 1093 aa4.94□□□□□ -1.62
CHD1-206ENST00000511067 RAF1P04049 648 aa4.94□□□□□ -1.62
CHD1-206ENST00000511067 DLATP10515 647 aaKnown RBP4.94□□□□□ -1.62
CHD1-206ENST00000511067 SLC2A2P11168 524 aaPredicted RBP4.94□□□□□ -1.62
CHD1-206ENST00000511067 HLA-DPA1P20036 260 aa4.94□□□□□ -1.62
CHD1-206ENST00000511067 RPP38P78345 283 aaKnown RBP4.94□□□□□ -1.62
CHD1-206ENST00000511067 ARF5P84085 180 aa4.94□□□□□ -1.62
CHD1-206ENST00000511067 ACTN3Q08043 901 aaPredicted RBP4.94□□□□□ -1.62
CHD1-206ENST00000511067 RPS6KA1Q15418 735 aa4.94□□□□□ -1.62
CHD1-206ENST00000511067 ZNF74Q16587 644 aa4.94□□□□□ -1.62
CHD1-206ENST00000511067 AGAP6Q5VW22 663 aa4.94□□□□□ -1.62
CHD1-206ENST00000511067 FAM53AQ6NSI3 398 aaPredicted RBP4.94□□□□□ -1.62
CHD1-206ENST00000511067 SLC25A47Q6Q0C1 308 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms