RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 COCHO43405 550 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 PLRG1O43660 514 aaKnown RBP6.1□□□□□ -1.43
USP53-206ENST00000510737 FAM189A1O60320 539 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 FAM155BO75949 473 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 CLDN1O95832 211 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 IGHDP01880 384 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 CENPBP07199 599 aaPredicted RBP6.1□□□□□ -1.43
USP53-206ENST00000510737 GIMD1P0DJR0 217 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 UQCRFS1P47985 274 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 TSPY1Q01534 308 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 TAF10Q12962 218 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 ZNF234Q14588 700 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 FHL5Q5TD97 284 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 GALNT17Q6IS24 598 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 WDR73Q6P4I2 378 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 FAM171BQ6P995 826 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 B3GNT6Q6ZMB0 384 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 TPGS1Q6ZTW0 290 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 DENND5BQ6ZUT9 1274 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 PDCL2Q8N4E4 241 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 ZNF485Q8NCK3 441 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 RND1Q92730 232 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 BBS2Q9BXC9 721 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 ERVMER34-1Q9H9K5 563 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 TUFT1Q9NNX1 390 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 GDF3Q9NR23 364 aa6.1□□□□□ -1.43
USP53-206ENST00000510737 ANAPC1Q9H1A4 1944 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 HIVEP1P15822 2718 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 C10orf142B7Z368 130 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 CASC3O15234 703 aaKnown RBP6.09□□□□□ -1.43
USP53-206ENST00000510737 SLC16A4O15374 487 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 SDC3O75056 442 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 CDH1P12830 882 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 MAGEA11P43364 429 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 RPS14P62263 151 aaKnown RBP6.09□□□□□ -1.43
USP53-206ENST00000510737 IL20RBQ6UXL0 311 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 MOB3CQ70IA8 216 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 MYPOPQ86VE0 399 aaPredicted RBP6.09□□□□□ -1.43
USP53-206ENST00000510737 FOXRED2Q8IWF2 684 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 ARL14Q8N4G2 192 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 OR2T3Q8NH03 318 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 SKA1Q96BD8 255 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 ALG14Q96F25 216 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 TSPAN18Q96SJ8 248 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 ABCG4Q9H172 646 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 LHX5Q9H2C1 402 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 ADNPQ9H2P0 1102 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 ZNF71Q9NQZ8 489 aaPredicted RBP6.09□□□□□ -1.43
USP53-206ENST00000510737 WDR35Q9P2L0 1181 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 CHORDC1Q9UHD1 332 aaPredicted RBP6.09□□□□□ -1.43
USP53-206ENST00000510737 A3GALT2U3KPV4 340 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 U3KQA8 63 aa6.09□□□□□ -1.43
USP53-206ENST00000510737 ABCA2Q9BZC7 2435 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 NBASA2RRP1 2371 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 TYW5A2RUC4 315 aaKnown RBP6.08□□□□□ -1.44
USP53-206ENST00000510737 FAM47DPA6NHR8 397 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 FAM72CH0Y354 149 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 KLK8O60259 260 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 RTN2O75298 545 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 GP1BAP07359 652 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 KRT7P08729 469 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 IRF1P10914 325 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 RARGP13631 454 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 TNNT1P13805 278 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 BDNFP23560 247 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 LMO2P25791 158 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 RPA1P27694 616 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 GALCP54803 685 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 MFAP3P55082 362 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 MLLT10P55197 1068 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 CDH8P55286 799 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 NOP14P78316 857 aaKnown RBP6.08□□□□□ -1.44
USP53-206ENST00000510737 MYL7Q01449 175 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 FAM72AQ5TYM5 149 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 TMEM215Q68D42 235 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 FAM72DQ6L9T8 149 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 GFRALQ6UXV0 394 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 VASH2Q86V25 355 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 FAM72BQ86X60 149 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 GJC3Q8NFK1 279 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 OR4C6Q8NH72 309 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 TWNKQ96RR1 684 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 NAP1L4Q99733 375 aaKnown RBP6.08□□□□□ -1.44
USP53-206ENST00000510737 SGK2Q9HBY8 427 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 ELOVL2Q9NXB9 296 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 DPP3Q9NY33 737 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 TAAR2Q9P1P5 351 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 TINAGQ9UJW2 476 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 CPSF3Q9UKF6 684 aaKnown RBP6.08□□□□□ -1.44
USP53-206ENST00000510737 CLEC4EQ9ULY5 219 aa6.08□□□□□ -1.44
USP53-206ENST00000510737 PTPRJQ12913 1337 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 TIPRLO75663 272 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 CHRM4P08173 479 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 CD53P19397 219 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 MATR3P43243 847 aaKnown RBP eCLIP6.07□□□□□ -1.449e-7■■■■□ 20.5
USP53-206ENST00000510737 PGFP49763 221 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 NR0B1P51843 470 aaKnown RBP6.07□□□□□ -1.44
USP53-206ENST00000510737 GOLGA8FQ08AF8 430 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 BLMHQ13867 455 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 TMEM132DQ14C87 1099 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms