RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 CLDN15P56746 228 aa2.58□□□□□ -2
NF1-213ENST00000489712 FKBP3Q00688 224 aaKnown RBP2.58□□□□□ -2
NF1-213ENST00000489712 NUCB1Q02818 461 aa2.58□□□□□ -2
NF1-213ENST00000489712 PRKG2Q13237 762 aa2.58□□□□□ -2
NF1-213ENST00000489712 KIAA0141Q14154 515 aaPredicted RBP2.58□□□□□ -2
NF1-213ENST00000489712 LETM2Q2VYF4 491 aa2.58□□□□□ -2
NF1-213ENST00000489712 RNF212Q495C1 297 aa2.58□□□□□ -2
NF1-213ENST00000489712 SPECC1Q5M775 1068 aa2.58□□□□□ -2
NF1-213ENST00000489712 CFAP161Q6P656 301 aa2.58□□□□□ -2
NF1-213ENST00000489712 TIPARPQ7Z3E1 657 aaKnown RBP2.58□□□□□ -2
NF1-213ENST00000489712 CENPVQ7Z7K6 275 aaPredicted RBP2.58□□□□□ -2
NF1-213ENST00000489712 OR4N5Q8IXE1 308 aa2.58□□□□□ -2
NF1-213ENST00000489712 TCEANCQ8N8B7 351 aa2.58□□□□□ -2
NF1-213ENST00000489712 TC2NQ8N9U0 490 aa2.58□□□□□ -2
NF1-213ENST00000489712 OR52B6Q8NGF0 335 aa2.58□□□□□ -2
NF1-213ENST00000489712 TYMSOSQ8TAI1 123 aa2.58□□□□□ -2
NF1-213ENST00000489712 MUS81Q96NY9 551 aa2.58□□□□□ -2
NF1-213ENST00000489712 KLHL5Q96PQ7 755 aa2.58□□□□□ -2
NF1-213ENST00000489712 APOL6Q9BWW8 343 aa2.58□□□□□ -2
NF1-213ENST00000489712 EGLN3Q9H6Z9 239 aa2.58□□□□□ -2
NF1-213ENST00000489712 JPT2Q9H910 190 aa2.58□□□□□ -2
NF1-213ENST00000489712 HACD3Q9P035 362 aa2.58□□□□□ -2
NF1-213ENST00000489712 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.58□□□□□ -2
NF1-213ENST00000489712 ZNF107Q9UII5 783 aaPredicted RBP2.58□□□□□ -2
NF1-213ENST00000489712 ANAPC2Q9UJX6 822 aa2.58□□□□□ -2
NF1-213ENST00000489712 TRAV24A0A0B4J272 114 aa2.57□□□□□ -2
NF1-213ENST00000489712 IGHV3-20A0A0C4DH32 117 aa2.57□□□□□ -2
NF1-213ENST00000489712 IGHV3-38A0A0C4DH36 116 aa2.57□□□□□ -2
NF1-213ENST00000489712 EDDM13A0A1B0GTR0 161 aa2.57□□□□□ -2
NF1-213ENST00000489712 IQCMA0A1B0GVH7 501 aa2.57□□□□□ -2
NF1-213ENST00000489712 TCRBV21S2A2A0A5A6 115 aa2.57□□□□□ -2
NF1-213ENST00000489712 PHF1O43189 567 aaPredicted RBP2.57□□□□□ -2
NF1-213ENST00000489712 ADAM20O43506 726 aa2.57□□□□□ -2
NF1-213ENST00000489712 TLX2O43763 284 aaPredicted RBP2.57□□□□□ -2
NF1-213ENST00000489712 CYTIPO60759 359 aa2.57□□□□□ -2
NF1-213ENST00000489712 ATP6AP2O75787 350 aa2.57□□□□□ -2
NF1-213ENST00000489712 PGM3O95394 542 aa2.57□□□□□ -2
NF1-213ENST00000489712 PCP11498 1178 aaKnown RBP2.57□□□□□ -2
NF1-213ENST00000489712 NNMTP40261 264 aa2.57□□□□□ -2
NF1-213ENST00000489712 SNTB1Q13884 538 aaKnown RBP2.57□□□□□ -2
NF1-213ENST00000489712 TOMM20Q15388 145 aa2.57□□□□□ -2
NF1-213ENST00000489712 ALDH1L2Q3SY69 923 aa2.57□□□□□ -2
NF1-213ENST00000489712 ATP1A1-AS1Q5TC04 95 aa2.57□□□□□ -2
NF1-213ENST00000489712 KRT39Q6A163 491 aa2.57□□□□□ -2
NF1-213ENST00000489712 ZBTB49Q6ZSB9 765 aa2.57□□□□□ -2
NF1-213ENST00000489712 CATSPER3Q86XQ3 398 aa2.57□□□□□ -2
NF1-213ENST00000489712 MAML2Q8IZL2 1156 aaPredicted RBP2.57□□□□□ -2
NF1-213ENST00000489712 FGFRL1Q8N441 504 aa2.57□□□□□ -2
NF1-213ENST00000489712 LRTM2Q8N967 370 aa2.57□□□□□ -2
NF1-213ENST00000489712 AVL9Q8NBF6 648 aa2.57□□□□□ -2
NF1-213ENST00000489712 OR4C15Q8NGM1 316 aa2.57□□□□□ -2
NF1-213ENST00000489712 SPPL2AQ8TCT8 520 aa2.57□□□□□ -2
NF1-213ENST00000489712 FEVQ99581 238 aa2.57□□□□□ -2
NF1-213ENST00000489712 NUDT16L1Q9BRJ7 211 aaKnown RBP2.57□□□□□ -2
NF1-213ENST00000489712 DNAI2Q9GZS0 605 aa2.57□□□□□ -2
NF1-213ENST00000489712 ADNPQ9H2P0 1102 aa2.57□□□□□ -2
NF1-213ENST00000489712 TBC1D13Q9NVG8 400 aa2.57□□□□□ -2
NF1-213ENST00000489712 NRBP1Q9UHY1 535 aa2.57□□□□□ -2
NF1-213ENST00000489712 MAGED1Q9Y5V3 778 aaPredicted RBP2.57□□□□□ -2
NF1-213ENST00000489712 CYP11B2P19099 503 aa2.56□□□□□ -2
NF1-213ENST00000489712 PKLRP30613 574 aa2.56□□□□□ -2
NF1-213ENST00000489712 ACTN2P35609 894 aa2.56□□□□□ -2
NF1-213ENST00000489712 CSE1LP55060 971 aaKnown RBP2.56□□□□□ -2
NF1-213ENST00000489712 ERVK-16P61578 105 aa2.56□□□□□ -2
NF1-213ENST00000489712 POLR2LP62875 67 aaKnown RBP2.56□□□□□ -2
NF1-213ENST00000489712 POU5F1Q01860 360 aaKnown RBP2.56□□□□□ -2
NF1-213ENST00000489712 RASGEF1BQ0VAM2 473 aa2.56□□□□□ -2
NF1-213ENST00000489712 ILF2Q12905 390 aaKnown RBP2.56□□□□□ -2
NF1-213ENST00000489712 ZNF146Q15072 292 aa2.56□□□□□ -2
NF1-213ENST00000489712 NONOQ15233 471 aaKnown RBP eCLIP2.56□□□□□ -2
NF1-213ENST00000489712 UPP1Q16831 310 aa2.56□□□□□ -2
NF1-213ENST00000489712 TMEM266Q2M3C6 531 aa2.56□□□□□ -2
NF1-213ENST00000489712 SPATA1Q5VX52 437 aa2.56□□□□□ -2
NF1-213ENST00000489712 OR4C11Q6IEV9 310 aa2.56□□□□□ -2
NF1-213ENST00000489712 VITQ6UXI7 678 aa2.56□□□□□ -2
NF1-213ENST00000489712 BAIAP2L2Q6UXY1 529 aa2.56□□□□□ -2
NF1-213ENST00000489712 CCDC60Q8IWA6 550 aaPredicted RBP2.56□□□□□ -2
NF1-213ENST00000489712 RPLP0P6Q8NHW5 317 aa2.56□□□□□ -2
NF1-213ENST00000489712 ERP27Q96DN0 273 aa2.56□□□□□ -2
NF1-213ENST00000489712 OTUB1Q96FW1 271 aaPredicted RBP2.56□□□□□ -2
NF1-213ENST00000489712 OCR1Q9BZK8 76 aa2.56□□□□□ -2
NF1-213ENST00000489712 GPR88Q9GZN0 384 aa2.56□□□□□ -2
NF1-213ENST00000489712 SDCBP2Q9H190 292 aa2.56□□□□□ -2
NF1-213ENST00000489712 TBC1D7Q9P0N9 293 aa2.56□□□□□ -2
NF1-213ENST00000489712 IL36AQ9UHA7 158 aa2.56□□□□□ -2
NF1-213ENST00000489712 RPS6KA6Q9UK32 745 aa2.56□□□□□ -2
NF1-213ENST00000489712 TTLL3Q9Y4R7 772 aa2.56□□□□□ -2
NF1-213ENST00000489712 TRPV2Q9Y5S1 764 aa2.56□□□□□ -2
NF1-213ENST00000489712 MYH15Q9Y2K3 1946 aa2.56□□□□□ -2
NF1-213ENST00000489712 TRBC2A0A5B9 178 aa2.55□□□□□ -2
NF1-213ENST00000489712 CCER2I3L3R5 266 aa2.55□□□□□ -2
NF1-213ENST00000489712 AP5Z1O43299 807 aa2.55□□□□□ -2
NF1-213ENST00000489712 ZNF354AO60765 605 aaPredicted RBP2.55□□□□□ -2
NF1-213ENST00000489712 MTRF1O75570 445 aaKnown RBP2.55□□□□□ -2
NF1-213ENST00000489712 GSRP00390 522 aa2.55□□□□□ -2
NF1-213ENST00000489712 RPLP0P05388 317 aaKnown RBP2.55□□□□□ -2
NF1-213ENST00000489712 MYL6BP14649 208 aa2.55□□□□□ -2
NF1-213ENST00000489712 GPR183P32249 361 aa2.55□□□□□ -2
NF1-213ENST00000489712 KHKP50053 298 aa2.55□□□□□ -2
NF1-213ENST00000489712 ATP4BP51164 291 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms