RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 BORCS5Q969J3 196 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 RAD51AP1Q96B01 352 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 TRMT2BQ96GJ1 504 aaKnown RBP8.84□□□□□ -0.99
CALD1-220ENST00000482470 IL4I1Q96RQ9 567 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 KLHL25Q9H0H3 589 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 TRIM39Q9HCM9 518 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 THG1LQ9NWX6 298 aaKnown RBP8.84□□□□□ -0.99
CALD1-220ENST00000482470 ERVK-18Q9QC07 812 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 SARDHQ9UL12 918 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 ANGPT4Q9Y264 503 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 H7C0S8 307 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 ATE1O95260 518 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 BMP10O95393 424 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 CTSAP10619 480 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 JUPP14923 745 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 ZNF30P17039 623 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 DNAJA1P31689 397 aaKnown RBP8.84□□□□□ -0.99
CALD1-220ENST00000482470 CLCNKAP51800 687 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 ERVFC1P60507 584 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 VBP1P61758 197 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 RAPSNQ13702 412 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 NFE2L1Q14494 772 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 ZNF805Q5CZA5 627 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 PLEKHS1Q5SXH7 462 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 ATG9BQ674R7 924 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 TYW3Q6IPR3 259 aaKnown RBP8.84□□□□□ -0.99
CALD1-220ENST00000482470 HTR3DQ70Z44 454 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 P2RY8Q86VZ1 359 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 AMZ2Q86W34 360 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 RNF130Q86XS8 419 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 CROCCP3Q8IVE0 287 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 NPAS3Q8IXF0 933 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 TFGQ92734 400 aaPredicted RBP8.84□□□□□ -0.99
CALD1-220ENST00000482470 PDLIM5Q96HC4 596 aaKnown RBP8.84□□□□□ -0.99
CALD1-220ENST00000482470 CHCHD6Q9BRQ6 235 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 COPS4Q9BT78 406 aa8.84□□□□□ -0.99
CALD1-220ENST00000482470 ARID1BQ8NFD5 2236 aaPredicted RBP8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3DA0A087WVF3 549 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3IA0A087WXS9 549 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3EA0A087X179 549 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3KA0A087X1G2 549 aa8.83□□□□□ -1
CALD1-220ENST00000482470 ASPDHA6ND91 283 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3FA6NER0 549 aaPredicted RBP8.83□□□□□ -1
CALD1-220ENST00000482470 ZNF99A8MXY4 864 aaPredicted RBP8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3LB9A6J9 549 aa8.83□□□□□ -1
CALD1-220ENST00000482470 H7BY64 318 aa8.83□□□□□ -1
CALD1-220ENST00000482470 ABCB7O75027 752 aa8.83□□□□□ -1
CALD1-220ENST00000482470 INMTO95050 263 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3HP0C7X1 549 aa8.83□□□□□ -1
CALD1-220ENST00000482470 CDK4P11802 303 aa8.83□□□□□ -1
CALD1-220ENST00000482470 PFKLP17858 780 aa8.83□□□□□ -1
CALD1-220ENST00000482470 HLCSP50747 726 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBPL1P62380 186 aa8.83□□□□□ -1
CALD1-220ENST00000482470 DPY19L1Q2PZI1 675 aa8.83□□□□□ -1
CALD1-220ENST00000482470 GPAT3Q53EU6 434 aa8.83□□□□□ -1
CALD1-220ENST00000482470 C2orf27AQ580R0 203 aa8.83□□□□□ -1
CALD1-220ENST00000482470 RUNDC3AQ59EK9 446 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3GQ6DHY5 549 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3CQ6IPX1 549 aa8.83□□□□□ -1
CALD1-220ENST00000482470 ADNP2Q6IQ32 1131 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
CALD1-220ENST00000482470 PRR23BQ6ZRT6 265 aa8.83□□□□□ -1
CALD1-220ENST00000482470 NCCRP1Q6ZVX7 275 aaPredicted RBP8.83□□□□□ -1
CALD1-220ENST00000482470 PTCHD4Q6ZW05 846 aa8.83□□□□□ -1
CALD1-220ENST00000482470 CCDC103Q8IW40 242 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D3Q8IZP1 549 aaPredicted RBP8.83□□□□□ -1
CALD1-220ENST00000482470 OR8H2Q8N162 312 aa8.83□□□□□ -1
CALD1-220ENST00000482470 MFSD2AQ8NA29 543 aa8.83□□□□□ -1
CALD1-220ENST00000482470 BTN2A2Q8WVV5 523 aa8.83□□□□□ -1
CALD1-220ENST00000482470 ASB11Q8WXH4 323 aa8.83□□□□□ -1
CALD1-220ENST00000482470 SGCDQ92629 289 aa8.83□□□□□ -1
CALD1-220ENST00000482470 UBE2E3Q969T4 207 aa8.83□□□□□ -1
CALD1-220ENST00000482470 PRAP1Q96NZ9 151 aa8.83□□□□□ -1
CALD1-220ENST00000482470 NTMT1Q9BV86 223 aa8.83□□□□□ -1
CALD1-220ENST00000482470 SORBS1Q9BX66 1292 aaKnown RBP8.83□□□□□ -1
CALD1-220ENST00000482470 XKR8Q9H6D3 395 aa8.83□□□□□ -1
CALD1-220ENST00000482470 C11orf16Q9NQ32 467 aa8.83□□□□□ -1
CALD1-220ENST00000482470 GIMAP4Q9NUV9 329 aa8.83□□□□□ -1
CALD1-220ENST00000482470 ARNTLO00327 626 aa8.83□□□□□ -1
CALD1-220ENST00000482470 KRT75O95678 551 aa8.83□□□□□ -1
CALD1-220ENST00000482470 PAK4O96013 591 aaPredicted RBP8.83□□□□□ -1
CALD1-220ENST00000482470 TCF3P15923 654 aa8.83□□□□□ -1
CALD1-220ENST00000482470 AOAHP28039 575 aa8.83□□□□□ -1
CALD1-220ENST00000482470 PTGER1P34995 402 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TMED10P49755 219 aaKnown RBP8.83□□□□□ -1
CALD1-220ENST00000482470 ELP6Q0PNE2 266 aa8.83□□□□□ -1
CALD1-220ENST00000482470 SCARB2Q14108 478 aa8.83□□□□□ -1
CALD1-220ENST00000482470 DHCR24Q15392 516 aa8.83□□□□□ -1
CALD1-220ENST00000482470 SKIV2LQ15477 1246 aaKnown RBP8.83□□□□□ -1
CALD1-220ENST00000482470 SDE2Q6IQ49 451 aa8.83□□□□□ -1
CALD1-220ENST00000482470 CYP4Z1Q86W10 505 aa8.83□□□□□ -1
CALD1-220ENST00000482470 TBC1D19Q8N5T2 526 aa8.83□□□□□ -1
CALD1-220ENST00000482470 OR7G3Q8NG95 312 aa8.83□□□□□ -1
CALD1-220ENST00000482470 OR10G2Q8NGC3 310 aa8.83□□□□□ -1
CALD1-220ENST00000482470 OR2A12Q8NGT7 310 aa8.83□□□□□ -1
CALD1-220ENST00000482470 OR14C36Q8NHC7 312 aa8.83□□□□□ -1
CALD1-220ENST00000482470 RAB2BQ8WUD1 216 aa8.83□□□□□ -1
CALD1-220ENST00000482470 NEIL2Q969S2 332 aa8.83□□□□□ -1
CALD1-220ENST00000482470 HERC2P3Q9BVR0 1158 aa8.83□□□□□ -1
CALD1-220ENST00000482470 NPLQ9BXD5 320 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms