RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 IFT27Q9BW83 186 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 RGS17Q9UGC6 210 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-216ENST00000481242 CYP8B1Q9UNU6 501 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 MYH2Q9UKX2 1941 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 SAGE2PA6NJ88 616 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 LOC730098B7Z3J9 87 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 PSMD11O00231 422 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 DLX3O60479 287 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 LINGO3P0C6S8 592 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 RPL10P27635 214 aaKnown RBP9.19□□□□□ -0.94
GARNL3-216ENST00000481242 RABIFP47224 123 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 AP3S2P59780 193 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF763Q0D2J5 394 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 QPRTQ15274 297 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 PRRT3Q5FWE3 981 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 C9orf43Q8TAL5 461 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-216ENST00000481242 SEC14L1Q92503 715 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF382Q96SR6 550 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 CD320Q9NPF0 282 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 FKBP14Q9NWM8 211 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 PPM1HQ9ULR3 514 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 KAT6AQ92794 2004 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 A0A1W2PP55 124 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 MYADML2A6NDP7 307 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 CAPN8A6NHC0 703 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 TNFRSF10BO14763 440 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 CYP4B1P13584 511 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 CREB1P16220 341 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 AHCYP23526 432 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 SDC2P34741 201 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 HMGCS1Q01581 520 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 ST3GAL3Q11203 375 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 RPA4Q13156 261 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 KIAA0319Q5VV43 1072 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 EGFLAMQ63HQ2 1017 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 PM20D1Q6GTS8 502 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 ALKBH2Q6NS38 261 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 PLXDC1Q8IUK5 500 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 C12orf76Q8N812 135 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-216ENST00000481242 OR4F6Q8NGB9 312 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 FAR1Q8WVX9 515 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 TMEM234Q8WY98 164 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 CPNE2Q96FN4 548 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-216ENST00000481242 CIB1Q99828 191 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 PRKAB1Q9Y478 270 aa9.19□□□□□ -0.94
GARNL3-216ENST00000481242 AHSA1O95433 338 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 CA3P07451 260 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 GNG2P59768 71 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 CDK6Q00534 326 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 MAPK14Q16539 360 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF423Q2M1K9 1284 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 GOLGA7Q7Z5G4 137 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 PIGKQ92643 395 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 DAZLQ92904 295 aaKnown RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 SHISA4Q96DD7 197 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF717Q9BY31 904 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 AKTIPQ9H8T0 292 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 TMEM138Q9NPI0 162 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ARFGEF2Q9Y6D5 1785 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 CCDC182A6NF36 153 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 PDCD5O14737 125 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 HCRTO43612 131 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 KHDRBS3O75525 346 aaKnown RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 SIX3O95343 332 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 HNF1BP35680 557 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 BDKRB1P46663 353 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 C5orf22Q49AR2 442 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 TMEM35AQ53FP2 167 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 SYCE2Q6PIF2 218 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 UNC5DQ6UXZ4 953 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 DCP2Q8IU60 420 aaKnown RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 PACRGLQ8N7B6 248 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 OR4K14Q8NGD5 310 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 IPCEF1Q8WWN9 437 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 HAVCR1Q96D42 359 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 DHRS1Q96LJ7 313 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 GPR174Q9BXC1 333 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 KLHL31Q9H511 634 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 KLRF1Q9NZS2 232 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 FZD4Q9ULV1 537 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 TMEM98Q9Y2Y6 226 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 MED31Q9Y3C7 131 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 TESMINQ9Y4I5 508 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 C4BP0C0L5 1744 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 NUP188Q5SRE5 1749 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 TMX2-CTNND1H3BSU7 103 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 CDH1P12830 882 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ATP4BP51164 291 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ARHGDIBP52566 201 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 GMFBP60983 142 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ZNF33BQ06732 778 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 SMCO1Q147U7 214 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 MAPK11Q15759 364 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 UBASH3BQ8TF42 649 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 PIWIL1Q96J94 861 aaKnown RBP9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ZSWIM3Q96MP5 696 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 PEBP4Q96S96 227 aa9.18□□□□□ -0.94
GARNL3-216ENST00000481242 ARHGAP9Q9BRR9 750 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms