RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 RCOR2Q8IZ40 523 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 RASGEF1AQ8N9B8 481 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 TSACCQ96A04 125 aaPredicted RBP2.86□□□□□ -1.95
RBM39-228ENST00000471635 SKA1Q96BD8 255 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 BTBD9Q96Q07 612 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 ABHD1Q96SE0 405 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 CPNE1Q99829 537 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 PI4K2AQ9BTU6 479 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 CCDC28BQ9BUN5 200 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 NOL11Q9H8H0 719 aaKnown RBP2.86□□□□□ -1.95
RBM39-228ENST00000471635 CNOT10Q9H9A5 744 aaKnown RBP2.86□□□□□ -1.95
RBM39-228ENST00000471635 BLOC1S4Q9NUP1 217 aa2.86□□□□□ -1.95
RBM39-228ENST00000471635 IGKV6D-21A0A0A0MT36 114 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 MTMR11A4FU01 709 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 CYTIPO60759 359 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 CSN3P07498 182 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 SAGP10523 405 aaPredicted RBP2.85□□□□□ -1.95
RBM39-228ENST00000471635 EPCAMP16422 314 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 CYP11B2P19099 503 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 AZGP1P25311 298 aaKnown RBP2.85□□□□□ -1.95
RBM39-228ENST00000471635 POLR2LP62875 67 aaKnown RBP2.85□□□□□ -1.95
RBM39-228ENST00000471635 NDPQ00604 133 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 STK4Q13043 487 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 CUL4AQ13619 759 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 ATP1A1-AS1Q5TC04 95 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 RNLSQ5VYX0 342 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 ITPRIPL1Q6GPH6 555 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 CYB5D1Q6P9G0 228 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 CAMKMTQ7Z624 323 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 RYBPQ8N488 228 aaPredicted RBP2.85□□□□□ -1.95
RBM39-228ENST00000471635 RPLP0P6Q8NHW5 317 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 SSC4DQ8WTU2 575 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 ROBO4Q8WZ75 1007 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 PROX1Q92786 737 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 SERAC1Q96JX3 654 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 DGAT2Q96PD7 388 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 GCNAQ96QF7 691 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 CCDC106Q9BWC9 280 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 GSN-AS1Q9NRJ2 163 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 TBC1D13Q9NVG8 400 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 CPSF2Q9P2I0 782 aaKnown RBP2.85□□□□□ -1.95
RBM39-228ENST00000471635 IL17BQ9UHF5 180 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 POMT2Q9UKY4 750 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 TMEM5Q9Y2B1 443 aa2.85□□□□□ -1.95
RBM39-228ENST00000471635 ZNF256Q9Y2P7 627 aaPredicted RBP2.85□□□□□ -1.95
RBM39-228ENST00000471635 COL16A1Q07092 1604 aaPredicted RBP2.85□□□□□ -1.95
RBM39-228ENST00000471635 PDHXO00330 501 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 RTCAO00442 366 aaKnown RBP2.84□□□□□ -1.95
RBM39-228ENST00000471635 PTGESO14684 152 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 SH3BGRLO75368 114 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 ATP6AP2O75787 350 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 GSRP00390 522 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 RPLP0P05388 317 aaKnown RBP2.84□□□□□ -1.95
RBM39-228ENST00000471635 LIG4P49917 911 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 ASCL1P50553 236 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 CLDN15P56746 228 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 OR1D5P58170 312 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 ERVK-16P61578 105 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 IL11RAQ14626 422 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 MEA1Q16626 185 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 DUSP5Q16690 384 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 UPP1Q16831 310 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 VWC2Q2TAL6 325 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 FGD3Q5JSP0 725 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 ZBTB49Q6ZSB9 765 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 Q6ZVH6 145 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 C4orf32Q8N8J7 132 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 GBP7Q8N8V2 638 aaPredicted RBP2.84□□□□□ -1.95
RBM39-228ENST00000471635 OTUB1Q96FW1 271 aaPredicted RBP2.84□□□□□ -1.95
RBM39-228ENST00000471635 ZIM3Q96PE6 472 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 NEDD4LQ96PU5 975 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 FEVQ99581 238 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 OCR1Q9BZK8 76 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 KLHL4Q9C0H6 718 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 KIF25-AS1Q9Y6Z4 181 aa2.84□□□□□ -1.95
RBM39-228ENST00000471635 PRDM1O75626 825 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 BEST1O76090 585 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 THY1P04216 161 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 ABCB1P08183 1280 aaPredicted RBP2.83□□□□□ -1.96
RBM39-228ENST00000471635 PAX3P23760 479 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 PKLRP30613 574 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 CCR3P51677 355 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 FAM106AQ4KMX7 169 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 AGAP7PQ5VUJ5 663 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 DET1Q7L5Y6 550 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 SLC22A15Q8IZD6 547 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 TTC30BQ8N4P2 665 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 SYT2Q8N9I0 419 aaPredicted RBP2.83□□□□□ -1.96
RBM39-228ENST00000471635 SLC4A11Q8NBS3 891 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 OR4C15Q8NGM1 316 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 OR4Q3Q8NH05 313 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 SECISBP2LQ93073 1101 aaKnown RBP2.83□□□□□ -1.96
RBM39-228ENST00000471635 LINC00167Q96N53 147 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 NAP1L4Q99733 375 aaKnown RBP2.83□□□□□ -1.96
RBM39-228ENST00000471635 MXD3Q9BW11 206 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 DNAJC4Q9NNZ3 241 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 TXNDC16Q9P2K2 825 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 ABCD2Q9UBJ2 740 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 PLCL2Q9UPR0 1127 aa2.83□□□□□ -1.96
RBM39-228ENST00000471635 UMODL1Q5DID0 1318 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms