RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 HS6ST3Q8IZP7 471 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 MFSD4AQ8N468 514 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 OR6Q1Q8NGQ2 317 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 TRIM43Q96BQ3 446 aaPredicted RBP15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 FBXO8Q9NRD0 319 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 ABCB8Q9NUT2 735 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 SIRT5Q9NXA8 310 aa15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 THUMPD1Q9NXG2 353 aaKnown RBP15.27■□□□□ 0.03
TSPAN4-211ENST00000468468 ZBBXA8MT70 800 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 JUPP14923 745 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 ACPPP15309 386 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 CYP2A7P20853 494 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 LHCGRP22888 699 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 STK19P49842 368 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 RPP38P78345 283 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 MVKQ03426 396 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 SF1Q15637 639 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 USP45Q70EL2 814 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 AHSA2Q719I0 299 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 CCDC71Q8IV32 467 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 PAWRQ96IZ0 340 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 NDEL1Q9GZM8 345 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 PCDH12Q9NPG4 1184 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 ATAD3AQ9NVI7 634 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 MPC1LP0DKB6 136 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 CTSOP43234 321 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 IRF8Q02556 426 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 CREMQ03060 361 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 NPRL3Q12980 569 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 DDX39BQ13838 428 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 HIST2H2ACQ16777 129 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 PLEKHG6Q3KR16 790 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 LRRC73Q5JTD7 316 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 GAREM2Q75VX8 874 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 PRSS48Q7RTY5 328 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 STARD8Q92502 1023 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 RPL3LQ92901 407 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 LGALS12Q96DT0 336 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 CD84Q9UIB8 345 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 VPS4AQ9UN37 437 aa15.26■□□□□ 0.03
TSPAN4-211ENST00000468468 IGLV3-16A0A075B6K0 115 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 SERTM1A2A2V5 107 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 YY2O15391 372 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 TGM5O43548 720 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 LCKP06239 509 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 ITGA1P56199 1179 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 PFN3P60673 137 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 SNRPD1P62314 119 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 DMPKQ09013 629 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 SERPINA13PQ6UXR4 307 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 ZNF784Q8NCA9 323 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 PHF10Q8WUB8 498 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 FCRL1Q96LA6 429 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 MTERF1Q99551 399 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 SUV39H2Q9H5I1 410 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 FAM120CQ9NX05 1096 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 VPS29Q9UBQ0 182 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 TMPRSS11EQ9UL52 423 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 PNMA8BQ9ULN7 279 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 NUP214P35658 2090 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 GFYI3L273 518 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 PCDHGA12O60330 932 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 PRMT3O60678 531 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 MTX2O75431 263 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 WBP4O75554 376 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 C9P02748 559 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 LAMP1P11279 417 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 CD36P16671 472 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 GRK3P35626 688 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 TGFBR1P36897 503 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 PROX2Q3B8N5 592 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 FAM217AQ8IXS0 508 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 VOPP1Q96AW1 172 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 TPT1P8Q9HAU6 139 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 SACM1LQ9NTJ5 587 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 LSM7Q9UK45 103 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 TMA7Q9Y2S6 64 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 PCDHB11Q9Y5F2 797 aa15.25■□□□□ 0.03
TSPAN4-211ENST00000468468 MRPS14O60783 128 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 CKMP06732 381 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 NUDT7P0C024 238 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 SRCP12931 536 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 ATP1B2P14415 290 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 CD22P20273 847 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 FPGSQ05932 587 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 CAMK2GQ13555 558 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 XKR6Q5GH73 641 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 FAHD1Q6P587 224 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 PAGE2Q7Z2X7 111 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 GPR155Q7Z3F1 870 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 PLD3Q8IV08 490 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 BBS7Q8IWZ6 715 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 SYNPOQ8N3V7 929 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 OR8J2Q8NGG1 315 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 IPCEF1Q8WWN9 437 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 SH3KBP1Q96B97 665 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 ITPKCQ96DU7 683 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 BTBD2Q9BX70 525 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 BTBD3Q9Y2F9 522 aa15.24■□□□□ 0.03
TSPAN4-211ENST00000468468 LTBP2Q14767 1821 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms