RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PRUNE1Q86TP1 453 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 PLD3Q8IV08 490 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZC3H3Q8IXZ2 948 aaKnown RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 LRTM2Q8N967 370 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 CCDC63Q8NA47 563 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 SIDT2Q8NBJ9 832 aaKnown RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 NOA1Q8NC60 698 aaKnown RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 OR4A16Q8NH70 328 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 PHLDA1Q8WV24 401 aaPredicted RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZNF606Q8WXB4 792 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 HAS2Q92819 552 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 RFT1Q96AA3 541 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 BICD1Q96G01 975 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 VPS39Q96JC1 886 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 NECTIN4Q96NY8 510 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 FAM213AQ9BRX8 229 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 SIRPDQ9H106 197 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 NAPBQ9H115 298 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 SDCBP2Q9H190 292 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 COQ10BQ9H8M1 238 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 ECT2Q9H8V3 914 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 APOBEC3GQ9HC16 384 aaKnown RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 TCF7L2Q9NQB0 619 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 HIF1ANQ9NWT6 349 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 SPHK1Q9NYA1 384 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 CNOT2Q9NZN8 540 aaKnown RBP3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZDHHC2Q9UIJ5 367 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 STUB1Q9UNE7 303 aa3.84□□□□□ -1.79
HMGN3P1-201ENST00000453847 COL3A1P02461 1466 aaPredicted RBP3.84□□□□□ -1.8
HMGN3P1-201ENST00000453847 RAD54L2Q9Y4B4 1467 aa3.84□□□□□ -1.8
HMGN3P1-201ENST00000453847 EVPLQ92817 2033 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 A0A1W2PPI3 338 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 ARHGAP42A6NI28 874 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 F8WDY8 70 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 CYR61O00622 381 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 SOCS2O14508 198 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 ADAM12O43184 909 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 SCO2O43819 266 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 XPNPEP2O43895 674 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 LRP3O75074 770 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 PDE9AO76083 593 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 KRT3P12035 628 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 MSH3P20585 1137 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 CYP3A5P20815 502 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 GJB2P29033 226 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 PRDX6P30041 224 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 CCND2P30279 289 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 NR4A2P43354 598 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 ASMTP46597 345 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 GAS1P54826 345 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 EEF1A1P68104 462 aaKnown RBP3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 PRKCEQ02156 737 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 KLC1Q07866 573 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 CETN1Q12798 172 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 KIR2DS3Q14952 304 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 EZH2Q15910 746 aaKnown RBP3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 PHKG1Q16816 387 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 CCDC40Q4G0X9 1142 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 EEF1A1P5Q5VTE0 462 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZNF425Q6IV72 752 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 C11orf87Q6NUJ2 197 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 TTC27Q6P3X3 843 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 FUT10Q6P4F1 479 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 MACC1Q6ZN28 852 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZNF554Q86TJ5 538 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 PIM3Q86V86 326 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 THEM5Q8N1Q8 247 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 SMYD1Q8NB12 490 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC16A11Q8NCK7 471 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 GMCL1P1Q8NEA9 526 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR52N5Q8NH56 324 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 LNX1Q8TBB1 728 aaPredicted RBP3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC26A7Q8TE54 656 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 TSACCQ96A04 125 aaPredicted RBP3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 C14orf79Q96F83 325 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 CFAP36Q96G28 342 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 POLR3CQ9BUI4 534 aaPredicted RBP3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR2B2Q9GZK3 357 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 DPH5Q9H2P9 285 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 ELOVL5Q9NYP7 299 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR6C2Q9NZP2 312 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 MYO6Q9UM54 1294 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 PCDHA7Q9UN72 937 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 TNNQ9UQP3 1299 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 RIPK3Q9Y572 518 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 KDRP35968 1356 aa3.83□□□□□ -1.8
HMGN3P1-201ENST00000453847 NPC1L1Q9UHC9 1359 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 IL16Q14005 1332 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 TRBV5-5A0A0J9YX44 114 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 LOC101059948A0A1B0GTJ6 334 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 WDR91A4D1P6 747 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 MTMR11A4FU01 709 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 ANKRD61A6NGH8 418 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 C2orf81A6NN90 581 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 HNRNPCL2B2RXH8 293 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC22A2O15244 555 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 MLNRO43193 412 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 NOL3O60936 208 aaKnown RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 HSPA5P11021 654 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms