RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 IGHV4-31P0DP07 118 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 MSH3P20585 1137 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 CDH3P22223 829 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 EPHA2P29317 976 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 IL15P40933 162 aaPredicted RBP4.32□□□□□ -1.72
LINC00440-201ENST00000446579 RABIFP47224 123 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
LINC00440-201ENST00000446579 PDLIM4P50479 330 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 HMGN5P82970 282 aaKnown RBP4.32□□□□□ -1.72
LINC00440-201ENST00000446579 HTD2P86397 168 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 HYAL1Q12794 435 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 TRAP1Q12931 704 aaKnown RBP4.32□□□□□ -1.72
LINC00440-201ENST00000446579 MAPK11Q15759 364 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 KRTAP27-1Q3LI81 207 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 HSP90AA5PQ58FG0 334 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 SLC35D3Q5M8T2 416 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 IRAK1BP1Q5VVH5 260 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 NADSYN1Q6IA69 706 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 ABRAXAS1Q6UWZ7 409 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 UNQ6126/PRO20091Q6UXV3 157 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 UNC5DQ6UXZ4 953 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 TOM1L2Q6ZVM7 507 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 TUBA1AQ71U36 451 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 MCM10Q7L590 875 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 PRUNE1Q86TP1 453 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 CCDC60Q8IWA6 550 aaPredicted RBP4.32□□□□□ -1.72
LINC00440-201ENST00000446579 LAX1Q8IWV1 398 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 CCDC63Q8NA47 563 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 OR52E1Q8NGJ3 308 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 EXOC6Q8TAG9 804 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 SLCO4A1Q96BD0 722 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 DTD2Q96FN9 168 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 C16orf45Q96MC5 204 aaPredicted RBP4.32□□□□□ -1.72
LINC00440-201ENST00000446579 TSGA13Q96PP4 275 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 FAM111AQ96PZ2 611 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 IWS1Q96ST2 819 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 PRMT1Q99873 361 aaKnown RBP4.32□□□□□ -1.72
LINC00440-201ENST00000446579 TUBA1CQ9BQE3 449 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 IDI2Q9BXS1 227 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 LRRC4Q9HBW1 653 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 RAB9BQ9NP90 201 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 TAS2R3Q9NYW6 316 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 ACTR3BQ9P1U1 418 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 EXOC6BQ9Y2D4 811 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 AP1M2Q9Y6Q5 423 aa4.32□□□□□ -1.72
LINC00440-201ENST00000446579 CKAP5Q14008 2032 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 NPHP3Q7Z494 1330 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 ACSL4O60488 711 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 PPP1R3DO95685 299 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 IGHDP01880 384 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 TPM2P07951 284 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 MMP10P09238 476 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 CA6P23280 308 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 ACP1P24666 158 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 DUTP33316 252 aaKnown RBP4.31□□□□□ -1.72
LINC00440-201ENST00000446579 GAS1P54826 345 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 CETN1Q12798 172 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 ACKR1Q16570 336 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 KIF19Q2TAC6 998 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 PDLIM3Q53GG5 364 aaPredicted RBP4.31□□□□□ -1.72
LINC00440-201ENST00000446579 DCAF10Q5QP82 559 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 GALNT17Q6IS24 598 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 TTC27Q6P3X3 843 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 MFSD7Q6UXD7 560 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 SIGLEC15Q6ZMC9 328 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 ZNF852Q6ZMS4 543 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 KCTD8Q6ZWB6 473 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 MARK2Q7KZI7 788 aaKnown RBP4.31□□□□□ -1.72
LINC00440-201ENST00000446579 RTN4RL2Q86UN3 420 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 TMEM126BQ8IUX1 230 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 ELMOD2Q8IZ81 293 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 PRSS35Q8N3Z0 413 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 SORCS1Q8WY21 1168 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 PRCCQ92733 491 aaPredicted RBP4.31□□□□□ -1.72
LINC00440-201ENST00000446579 WBP2Q969T9 261 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 MRPL38Q96DV4 380 aaKnown RBP4.31□□□□□ -1.72
LINC00440-201ENST00000446579 ZNF560Q96MR9 790 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 SPATA13Q96N96 652 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 KCNK16Q96T55 309 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 CCDC3Q9BQI4 270 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 FAM213AQ9BRX8 229 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 CPVLQ9H3G5 476 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 CUEDC2Q9H467 287 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 RAVER2Q9HCJ3 691 aaKnown RBP4.31□□□□□ -1.72
LINC00440-201ENST00000446579 KCNMB3Q9NPA1 279 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 CHST11Q9NPF2 352 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 FAM207AQ9NSI2 230 aaPredicted RBP4.31□□□□□ -1.72
LINC00440-201ENST00000446579 MALT1Q9UDY8 824 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 TBK1Q9UHD2 729 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 UBQLN2Q9UHD9 624 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 CCPG1Q9ULG6 757 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 ZNF510Q9Y2H8 683 aa4.31□□□□□ -1.72
LINC00440-201ENST00000446579 STRAPQ9Y3F4 350 aaKnown RBP4.31□□□□□ -1.72
LINC00440-201ENST00000446579 TMEM129A0AVI4 362 aa4.3□□□□□ -1.72
LINC00440-201ENST00000446579 MAGEB16A2A368 324 aa4.3□□□□□ -1.72
LINC00440-201ENST00000446579 CCL24O00175 119 aa4.3□□□□□ -1.72
LINC00440-201ENST00000446579 TLR4O00206 839 aa4.3□□□□□ -1.72
LINC00440-201ENST00000446579 TULP2O00295 520 aa4.3□□□□□ -1.72
LINC00440-201ENST00000446579 PRKNO60260 465 aaPredicted RBP4.3□□□□□ -1.72
LINC00440-201ENST00000446579 NOL3O60936 208 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms