RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 MTMR10Q9NXD2 777 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 MLXQ9UH92 298 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 ERVW-1Q9UQF0 538 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 FGF10O15520 208 aaPredicted RBP7.6□□□□□ -1.19
SIK3-203ENST00000415541 GATCO43716 136 aaKnown RBP7.6□□□□□ -1.19
SIK3-203ENST00000415541 NDUFS3O75489 264 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 AHSGP02765 367 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 RAF1P04049 648 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 IGFBP5P24593 272 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 AZGP1P25311 298 aaKnown RBP7.6□□□□□ -1.19
SIK3-203ENST00000415541 TGFBR1P36897 503 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 TGFBR2P37173 567 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 LBX1P52954 281 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 RPS24P62847 133 aaKnown RBP7.6□□□□□ -1.19
SIK3-203ENST00000415541 TATDN3Q17R31 274 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 ZRANB3Q5FWF4 1079 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 TRIQKQ629K1 86 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 TXNDC11Q6PKC3 985 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 RASSF6Q6ZTQ3 369 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 C7orf61Q8IZ16 206 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 ARL14EPQ8N8R7 260 aaPredicted RBP7.6□□□□□ -1.19
SIK3-203ENST00000415541 CDYL2Q8N8U2 506 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 LPCAT1Q8NF37 534 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 OR6K2Q8NGY2 324 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 HMGCLL1Q8TB92 370 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 GANCQ8TET4 914 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 LRRC3Q9BY71 257 aa7.6□□□□□ -1.19
SIK3-203ENST00000415541 PAPPA2Q9BXP8 1791 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 TRIP12Q14669 1992 aaPredicted RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 FAM240BA0A1B0GVZ2 78 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 SLC38A8A6NNN8 435 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 GABRDO14764 452 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 DSCR3O14972 297 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 VPS4BO75351 444 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 VPS26AO75436 327 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 DNTTP04053 509 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 LBPP18428 481 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 PIGAP37287 484 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 MASP1P48740 699 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 RRAS2P62070 204 aaPredicted RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 PLIN5Q00G26 463 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 RAPSNQ13702 412 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 KEAP1Q14145 624 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 LIPIQ6XZB0 460 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 PAQR9Q6ZVX9 377 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 RTN4RL1Q86UN2 441 aaPredicted RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 KCNMB4Q86W47 210 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 TRIM69Q86WT6 500 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 C19orf60Q96EN9 201 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 FUBP3Q96I24 572 aaKnown RBP eCLIP7.59□□□□□ -1.19
SIK3-203ENST00000415541 COPS4Q9BT78 406 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 C11orf49Q9H6J7 331 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 ASAH2Q9NR71 780 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 PFDN2Q9UHV9 154 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 MTMR11A4FU01 709 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 CCL22O00626 93 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 CD3EAPO15446 510 aaKnown RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 RNGTTO60942 597 aaKnown RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 MT-CO1P00395 513 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 CSF2P04141 144 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 TPOP07202 933 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 FSHRP23945 695 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 CORO1AP31146 461 aaKnown RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 HSD17B2P37059 387 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 MAP2K6P52564 334 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 WNT3AP56704 352 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 ABATP80404 500 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 HSF2Q03933 536 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 IKZF1Q13422 519 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 LAPTM5Q13571 262 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 WSCD2Q2TBF2 565 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 SLC35F1Q5T1Q4 408 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 FCRLBQ6BAA4 426 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 PAMR1Q6UXH9 720 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 LINGO4Q6UY18 593 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 SLC39A5Q6ZMH5 540 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 SLC46A3Q7Z3Q1 461 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 SNX20Q7Z614 316 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 SLC37A3Q8NCC5 494 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 CLRN3Q8NCR9 226 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 Q96MT0 163 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 GPR137Q96N19 417 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 CYP2S1Q96SQ9 504 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 VAT1Q99536 393 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 TBL1YQ9BQ87 522 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 SLC39A8Q9C0K1 460 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 TNKS2Q9H2K2 1166 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 RHOJQ9H4E5 214 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 LDAHQ9H6V9 325 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 LIMD1Q9UGP4 676 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 PCDHB14Q9Y5E9 798 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 TNPO3Q9Y5L0 923 aaKnown RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 KLF2Q9Y5W3 355 aaPredicted RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 TRAV6A0A075B6T7 132 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 A0A087X1B8 175 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 A0A1W2PP18 115 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 OR6C65A6NJZ3 312 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 CCL16O15467 120 aa7.59□□□□□ -1.19
SIK3-203ENST00000415541 LZTS3O60299 673 aaPredicted RBP7.59□□□□□ -1.19
SIK3-203ENST00000415541 TBL1XO60907 577 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms