RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CCND1P24385 295 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 GRK3P35626 688 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLC26A3P40879 764 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 HNF4AP41235 474 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 CCR8P51685 355 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 AP1S2P56377 157 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 CKAP4Q07065 602 aaKnown RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 Q0VFX4 171 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 AIMP2Q13155 320 aaKnown RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 DSG2Q14126 1118 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 MYBPC3Q14896 1274 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 RBBP5Q15291 538 aaKnown RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 TUBB8Q3ZCM7 444 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 PLEKHN1Q494U1 663 aaPredicted RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 PRR30Q53SZ7 412 aaPredicted RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 GARNL3Q5VVW2 1013 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 JMJD6Q6NYC1 403 aaPredicted RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 SBSNQ6UWP8 590 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 FRA10AC1Q70Z53 315 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 ASPGQ86U10 573 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 THOC6Q86W42 341 aaKnown RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 ARHGEF39Q8N4T4 335 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 MFSD9Q8NBP5 474 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 CAMKVQ8NCB2 501 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 OR11G2Q8NGC1 345 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 OR56A3Q8NH54 315 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 FBF1Q8TES7 1133 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 ATL1Q8WXF7 558 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 PDLIM5Q96HC4 596 aaKnown RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 THOC3Q96J01 351 aaKnown RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 SMAD5Q99717 465 aaKnown RBP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 HAUS8Q9BT25 410 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 SPNS1Q9H2V7 528 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 LRRC4CQ9HCJ2 640 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 MKL2Q9ULH7 1088 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 DYRK1BQ9Y463 629 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 BOD1L1Q8NFC6 3051 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 KCNE1BA0A087WTH5 132 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 IGHV3-20A0A0C4DH32 117 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CTAGE15A4D2H0 777 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZNF860A6NHJ4 632 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 FAM159BA6NKW6 160 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 IDSB3KWA1 339 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 MAP2K7O14733 419 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 PRPF4O43172 522 aaKnown RBP eCLIP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 NDUFS4O43181 175 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 ENO2P09104 434 aaPredicted RBP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CCDC166P0CW27 439 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 ACPPP15309 386 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CXCR2P25025 360 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 VARSP26640 1264 aaKnown RBP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 GP5P40197 560 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 EFNA3P52797 238 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 EMP3P54852 163 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 POU4F1Q01851 419 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 GUCY2DQ02846 1103 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CAV1Q03135 178 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 RELAQ04206 551 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CBLBQ13191 982 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 EFTUD2Q15029 972 aaKnown RBP eCLIP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 INPP5JQ15735 1006 aaPredicted RBP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 PPP1R3AQ16821 1122 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 KBTBD12Q3ZCT8 623 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 MINDY4Q4G0A6 757 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 VWA5B1Q5TIE3 1220 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 ATG9BQ674R7 924 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLC6A19Q695T7 634 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 TMEM214Q6NUQ4 689 aaKnown RBP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 C8orf74Q6P047 294 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 LINC00696Q6ZRV3 163 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 TMPRSS11BQ86T26 416 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CTAGE6Q86UF2 777 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 PDSS2Q86YH6 399 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZC3H7AQ8IWR0 971 aaKnown RBP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CISD2Q8N5K1 135 aaKnown RBP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 EFCAB3Q8N7B9 438 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 OR51Q1Q8NH59 317 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CPT1CQ8TCG5 803 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLC5A11Q8WWX8 675 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 EXT2Q93063 718 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 NEIL2Q969S2 332 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 ESAMQ96AP7 390 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 MIB2Q96AX9 1013 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 TM4SF19Q96DZ7 209 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 C19orf60Q96EN9 201 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 MVB12AQ96EY5 273 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 RBBP8Q99708 897 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CPNE1Q99829 537 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 MCMBPQ9BTE3 642 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 RBCK1Q9BYM8 510 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 ANKHQ9HCJ1 492 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 NOVA2Q9UNW9 492 aaKnown RBP9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 NAALAD2Q9Y3Q0 740 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 MAP4K5Q9Y4K4 846 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 OARD1Q9Y530 152 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 PCDHGB7Q9Y5F8 929 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 CSAG2Q9Y5P2 127 aa9.65□□□□□ -0.86
NCKIPSD-202ENST00000413374 BAHCC1Q9P281 2608 aa9.65□□□□□ -0.87
NCKIPSD-202ENST00000413374 CFAP46Q8IYW2 2715 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms