RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 DERL2Q9GZP9 239 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 ELOVL6Q9H5J4 265 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 TMEM184CQ9NVA4 438 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 LOC102723532A0A0G2JNH3 316 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 MROH6A6NGR9 719 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 HAS3O00219 553 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 NUPL2O15504 423 aaKnown RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 SEMG1P04279 462 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 CRYBB2P43320 205 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 GBX2P52951 348 aaPredicted RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 EPHA5P54756 1037 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 ABATP80404 500 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 ZNF33AQ06730 810 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 CLLU1Q5K131 121 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 KLHL6Q8WZ60 621 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.249e-17■■■■■ 91.2
PTPA-207ENST00000393370 RBPMSQ93062 196 aaKnown RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 ZC3HAV1LQ96H79 300 aaKnown RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 ZNF382Q96SR6 550 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 FDXACB1Q9BRP7 624 aaPredicted RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 MARVELD1Q9BSK0 173 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 INPP5KQ9BT40 448 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 CDCA4Q9BXL8 241 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 SLC39A8Q9C0K1 460 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 ZNF214Q9UL59 606 aaPredicted RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 SMIM30A4D0T7 59 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 ZNF670-ZNF695F2Z2N8 137 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 ESR1P03372 595 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 MAXP61244 160 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 GRM7Q14831 915 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 SLC34A3Q8N130 599 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 LIX1Q8N485 282 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 C19orf18Q8NEA5 215 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 OR11H4Q8NGC9 324 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 OR8K5Q8NH50 307 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 EDEM1Q92611 657 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 HSH2DQ96JZ2 352 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 AARSD1Q9BTE6 412 aaKnown RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 DUSP16Q9BY84 665 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 ULBP1Q9BZM6 244 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 SIK2Q9H0K1 926 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 NXF3Q9H4D5 531 aaKnown RBP16.54■□□□□ 0.24
PTPA-207ENST00000393370 ARNT2Q9HBZ2 717 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 FAM105AQ9NUU6 356 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 GMEB2Q9UKD1 530 aa16.54■□□□□ 0.24
PTPA-207ENST00000393370 TNS1Q9HBL0 1735 aaKnown RBP16.53■□□□□ 0.24
PTPA-207ENST00000393370 ACSL4O60488 711 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 B3GALNT1O75752 331 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 RHOBTB1O94844 696 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 CDRT1O95170 752 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 CSTF3Q12996 717 aaKnown RBP16.53■□□□□ 0.24
PTPA-207ENST00000393370 RPA4Q13156 261 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 ZNF273Q14593 569 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 SLC39A12Q504Y0 691 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 LURAP1LQ8IV03 231 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 ZZZ3Q8IYH5 903 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 TAGAPQ8N103 731 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 REPS2Q8NFH8 660 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 C9orf43Q8TAL5 461 aaPredicted RBP16.53■□□□□ 0.24
PTPA-207ENST00000393370 FAM167AQ96KS9 214 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 FEVQ99581 238 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 ABHD16BQ9H3Z7 469 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 ZFP64Q9NPA5 681 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 FARSBQ9NSD9 589 aaKnown RBP16.53■□□□□ 0.24
PTPA-207ENST00000393370 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 MED16Q9Y2X0 877 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 ZNF175Q9Y473 711 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 GABRDO14764 452 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 GLP2RO95838 553 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 IL6P05231 212 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 SLC2A2P11168 524 aaPredicted RBP16.53■□□□□ 0.24
PTPA-207ENST00000393370 CCR1P32246 355 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 ITGA1P56199 1179 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 HNRNPA0Q13151 305 aaKnown RBP16.53■□□□□ 0.24
PTPA-207ENST00000393370 PGBD3Q8N328 593 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 OR6C4Q8NGE1 309 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 ULK4Q96C45 1275 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 LINC00052Q96N35 136 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 IFT22Q9H7X7 185 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 POPDC3Q9HBV1 291 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 IFT46Q9NQC8 304 aa16.53■□□□□ 0.24
PTPA-207ENST00000393370 ARPC4-TTLL3A0A0A6YYG9 625 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 LYRM1O43325 122 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 ORC5O43913 435 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 KLK8O60259 260 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 SCG5P05408 212 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 PROS1P07225 676 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 CKMT1AP12532 417 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 CDKN2CP42773 168 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 IHHQ14623 411 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 C18orf21Q32NC0 220 aaPredicted RBP16.52■□□□□ 0.24
PTPA-207ENST00000393370 KLHL12Q53G59 568 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 TRIQKQ629K1 86 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 SULF1Q8IWU6 871 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 SLC25A46Q96AG3 418 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 MTERF3Q96E29 417 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 SORCS2Q96PQ0 1159 aa16.52■□□□□ 0.24
PTPA-207ENST00000393370 SERHLQ9NQF3 203 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms