RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 GFYI3L273 518 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ZNF701M0R085 212 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 PRSS23O95084 383 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 EPN2O95208 641 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ZNF682O95780 498 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ALPLP05186 524 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 SRSF11Q05519 484 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 TOMM20Q15388 145 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 PYCR3Q53H96 274 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ARSIQ5FYB1 569 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 LRIF1Q5T3J3 769 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 OR4F3Q6IEY1 312 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 SLC51BQ86UW2 128 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 MSRB3Q8IXL7 192 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ADAMTS16Q8TE57 1224 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 CYB5D2Q8WUJ1 264 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 MED8Q96G25 268 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 APIPQ96GX9 242 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 MAP6Q96JE9 813 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 LMLNQ96KR4 655 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 PANX1Q96RD7 426 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 RIOK2Q9BVS4 552 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ASPSCR1Q9BZE9 553 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 TOR3AQ9H497 397 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 IKZF5Q9H5V7 419 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 DCAF13Q9NV06 445 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 COQ3Q9NZJ6 369 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 SAMD4AQ9UPU9 718 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 PRMT3O60678 531 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 LEFTY1O75610 366 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 COX7A2P14406 83 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 EPORP19235 508 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ZNF33BQ06732 778 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 CSTF3Q12996 717 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 RFX4Q33E94 735 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 LDLRAP1Q5SW96 308 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 GPR107Q5VW38 600 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 DOK6Q6PKX4 331 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ZNF621Q6ZSS3 439 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 USP51Q70EK9 711 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 HIPK1Q86Z02 1210 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ZCCHC7Q8N3Z6 543 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 TRAM1L1Q8N609 369 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 FAM86B1Q8N7N1 296 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 C12orf76Q8N812 135 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 OR2A12Q8NGT7 310 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 MYLIPQ8WY64 445 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ISOC1Q96CN7 298 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 REXO5Q96IC2 774 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 NPLQ9BXD5 320 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 RUVBL1Q9Y265 456 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 WASH3PC4AMC7 463 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 TMX2-CTNND1H3BSU7 103 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 FPGTO14772 594 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ATG13O75143 517 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 CPSF4O95639 269 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 MYOGP15173 224 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 PRKCAP17252 672 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 AMD1P17707 334 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 PRPH2P23942 346 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 CXCR2P25025 360 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 YAP1P46937 504 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 NAE1Q13564 534 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 GBX1Q14549 363 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 RBM48Q5RL73 367 aaKnown RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 SNAP47Q5SQN1 464 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ZNF773Q6PK81 442 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 HSD11B1LQ7Z5J1 315 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 CLIP4Q8N3C7 705 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 ST13P5Q8NFI4 369 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-204ENST00000392003 SORCS1Q8WY21 1168 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 SNX19Q92543 992 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 THAP11Q96EK4 314 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 PYURFQ96I23 114 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 INPP5KQ9BT40 448 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 EBPLQ9BY08 206 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 SMURF2Q9HAU4 748 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 VPS29Q9UBQ0 182 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 MAPRE3Q9UPY8 281 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 POLHQ9Y253 713 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 SNX5Q9Y5X3 404 aa9.33□□□□□ -0.92
COL6A3-204ENST00000392003 KCNE1BA0A087WTH5 132 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 LINC01553A4QN01 128 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 UPK1AO00322 258 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 UGDHO60701 494 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 TACR1P25103 407 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 HNF4AP41235 474 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 MAPK9P45984 424 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 NRIP1P48552 1158 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 DCDC1P59894 354 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 TOP3AQ13472 1001 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-204ENST00000392003 GPM6BQ13491 265 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 TUBA3CQ13748 450 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 GTF2H3Q13889 308 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 ACOX1Q15067 660 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 DUOXA1Q1HG43 343 aa9.32□□□□□ -0.92
COL6A3-204ENST00000392003 ERICH5Q6P6B1 374 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms