RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TMEM221A6NGB7 291 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 ANKDD1BA6NHY2 528 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 CCDC154A6NI56 674 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 ISM1B1AKI9 464 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 LMO7DNF2Z398 122 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 M0R296 226 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 MGRN1O60291 552 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 PRMT3O60678 531 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TACR1P25103 407 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 GSTM2P28161 218 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 GRK3P35626 688 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 CLNS1AP54105 237 aaKnown RBP13.53□□□□□ -0.24
SS18-201ENST00000269137 C21orf58P58505 322 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TEAD4Q15561 434 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 PMS2CLQ68D20 193 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 ZNF425Q6IV72 752 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TMEM26Q6ZUK4 368 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 FBXL6Q8N531 539 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 C1orf52Q8N6N3 182 aaKnown RBP13.53□□□□□ -0.24
SS18-201ENST00000269137 FLVCR1-AS1Q8TAF5 88 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 LMX1AQ8TE12 382 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TMEM74Q96NL1 305 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 LEF1Q9UJU2 399 aaPredicted RBP13.53□□□□□ -0.24
SS18-201ENST00000269137 ENTPD2Q9Y5L3 495 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 ASPDHA6ND91 283 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 YY2O15391 372 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 CFLARO15519 480 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 SEMA3DO95025 777 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 FKBP9O95302 570 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TBX6O95947 436 aaPredicted RBP13.53□□□□□ -0.24
SS18-201ENST00000269137 TGFB1P01137 390 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 IL6P05231 212 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 PSME3P61289 254 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 RAE1P78406 368 aaKnown RBP13.53□□□□□ -0.24
SS18-201ENST00000269137 HHEXQ03014 270 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 RIPK1Q13546 671 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 WASHC2DQ5SRD0 308 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 KIAA1614Q5VZ46 1190 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 LYSMD4Q5XG99 296 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 SFTPA2Q8IWL1 248 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 RIMKLAQ8IXN7 391 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 METTL4Q8N3J2 472 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TBC1D19Q8N5T2 526 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 DPP10Q8N608 796 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 ZNF548Q8NEK5 533 aaPredicted RBP13.53□□□□□ -0.24
SS18-201ENST00000269137 VPS33AQ96AX1 596 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TESCQ96BS2 214 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 CLPTM1LQ96KA5 538 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 HOPXQ9BPY8 73 aaPredicted RBP13.53□□□□□ -0.24
SS18-201ENST00000269137 DPH7Q9BTV6 452 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 MS4A8Q9BY19 250 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 OR51B5Q9H339 312 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 UCK1Q9HA47 277 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 GID8Q9NWU2 228 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 CROTQ9UKG9 612 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 PCDHGA7Q9Y5G6 932 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 TTC28Q96AY4 2481 aa13.53□□□□□ -0.24
SS18-201ENST00000269137 CABIN1Q9Y6J0 2220 aa13.52□□□□□ -0.24
SS18-201ENST00000269137 A0A1B0GTW7 788 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 FEZF1A0PJY2 475 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 OR6C74A6NCV1 312 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 B4DGG1 531 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 AQP9O43315 295 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 TNFSF14O43557 240 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 OR1F1O43749 312 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 LCMT2O60294 686 aaKnown RBP13.52□□□□□ -0.25
SS18-201ENST00000269137 CLEC3AO75596 197 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 NPPAP01160 153 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 PRPS1L1P21108 318 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 TIA1P31483 386 aaKnown RBP eCLIP13.52□□□□□ -0.25
SS18-201ENST00000269137 AHRP35869 848 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 ASMTP46597 345 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 FASLGP48023 281 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 MTTPP55157 894 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 CSTF1Q05048 431 aaKnown RBP13.52□□□□□ -0.25
SS18-201ENST00000269137 FOXM1Q08050 763 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 TIGD2Q4W5G0 525 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.52□□□□□ -0.25
SS18-201ENST00000269137 DEPDC1Q5TB30 811 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 BNC2Q6ZN30 1099 aaPredicted RBP13.52□□□□□ -0.25
SS18-201ENST00000269137 ADCK2Q7Z695 626 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 C17orf82Q86X59 251 aaPredicted RBP13.52□□□□□ -0.25
SS18-201ENST00000269137 FBXW8Q8N3Y1 598 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 KRTCAP2Q8N6L1 136 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 TSSK3Q96PN8 268 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 OR2A14Q96R47 310 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 CDRT15Q96T59 188 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 GPATCH1Q9BRR8 931 aaKnown RBP13.52□□□□□ -0.25
SS18-201ENST00000269137 DENND2DQ9H6A0 471 aaPredicted RBP13.52□□□□□ -0.25
SS18-201ENST00000269137 PRM3Q9NNZ6 103 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 AHSPQ9NZD4 102 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 SLC7A8Q9UHI5 535 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 DOLKQ9UPQ8 538 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 MAPRE3Q9UPY8 281 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 PCDHGA2Q9Y5H1 932 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 KLK4Q9Y5K2 254 aa13.52□□□□□ -0.25
SS18-201ENST00000269137 PIAS2O75928 621 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 ANXA4P09525 319 aaPredicted RBP13.51□□□□□ -0.25
SS18-201ENST00000269137 GNSP15586 552 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms