RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TRPS1Q9UHF7 1281 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ADGRE2Q9UHX3 823 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ZFP69BQ9UJL9 534 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ACSL6Q9UKU0 697 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.65□□□□□ -0.22
SSBP1-201ENST00000265304 LOXL2Q9Y4K0 774 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 ANGPTL3Q9Y5C1 460 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 PCDHB3Q9Y5E6 796 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 PCDHGA11Q9Y5H2 935 aa13.65□□□□□ -0.22
SSBP1-201ENST00000265304 CCDC88CQ9P219 2028 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 WDFY3Q8IZQ1 3526 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 ANKRD11Q6UB99 2663 aaPredicted RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 IGF2RP11717 2491 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 LOC105369274A0A096LPK9 316 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 LOC102723532A0A0G2JNH3 316 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 TMEM114B3SHH9 223 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 H0YGG7 62 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 FOXE1O00358 373 aaPredicted RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 TXNDC9O14530 226 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 NVLO15381 856 aaKnown RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 SNNO75324 88 aaPredicted RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 CLEC3AO75596 197 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 ENO1P06733 434 aaKnown RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 NR1D1P20393 614 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 BCL6P41182 706 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 PIK3CBP42338 1070 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 CCNG1P51959 295 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 ARFIP1P53367 373 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 ARF3P61204 181 aaPredicted RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 GPS2Q13227 327 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 RCN2Q14257 317 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 SLBPQ14493 270 aaKnown RBP eCLIP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 KCNAB1Q14722 419 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 ADPRMQ3LIE5 342 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 HHATQ5VTY9 493 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 YOD1Q5VVQ6 348 aaPredicted RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 FRMPD2BQ6IN97 320 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 LETMD1Q6P1Q0 360 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 RGS9BPQ6ZS82 235 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 DGLUCYQ7Z3D6 616 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 VN1R5Q7Z5H4 357 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 MILR1Q7Z6M3 343 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 OR4N4Q8N0Y3 316 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 KRT78Q8N1N4 520 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 TBC1D19Q8N5T2 526 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 TRPV3Q8NET8 790 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 OR7G3Q8NG95 312 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 OR4F6Q8NGB9 312 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 OR1L3Q8NH93 324 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 WDR20Q8TBZ3 569 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 MDM1Q8TC05 714 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 NT5CQ8TCD5 201 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 TRPC4APQ8TEL6 797 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 PPP4R1Q8TF05 950 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 MOCOSQ96EN8 888 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 LRFN5Q96NI6 719 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 SLC46A1Q96NT5 459 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 TAAR9Q96RI9 348 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 SLC29A3Q9BZD2 475 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 ASPSCR1Q9BZE9 553 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 KLHL25Q9H0H3 589 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 ACTR8Q9H981 624 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 SEMA4BQ9NPR2 832 aaPredicted RBP13.64□□□□□ -0.23
SSBP1-201ENST00000265304 SOHLH2Q9NX45 425 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 SERTAD3Q9UJW9 196 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 RNF11Q9Y3C5 154 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 MSRB2Q9Y3D2 182 aa13.64□□□□□ -0.23
SSBP1-201ENST00000265304 EFCAB7A8K855 629 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 CDRT15L2A8MXV6 281 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 HYAL3O43820 417 aaPredicted RBP13.63□□□□□ -0.23
SSBP1-201ENST00000265304 SERPINA6P08185 405 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 SMIM10L1P0DMW3 83 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 HPDP32754 393 aaPredicted RBP13.63□□□□□ -0.23
SSBP1-201ENST00000265304 ETV5P41161 510 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 PPM1FP49593 454 aaPredicted RBP13.63□□□□□ -0.23
SSBP1-201ENST00000265304 ARL4DP49703 201 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 ITGA1P56199 1179 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 HYAL2Q12891 473 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 TUBB3Q13509 450 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 ARL13AQ5H913 290 aaPredicted RBP13.63□□□□□ -0.23
SSBP1-201ENST00000265304 CFAP157Q5JU67 520 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 GARNL3Q5VVW2 1013 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 MED27Q6P2C8 311 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 TLDC1Q6P9B6 456 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 ZNF517Q6ZMY9 492 aaPredicted RBP13.63□□□□□ -0.23
SSBP1-201ENST00000265304 GPRIN3Q6ZVF9 776 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 RPS27LQ71UM5 84 aaKnown RBP13.63□□□□□ -0.23
SSBP1-201ENST00000265304 SYVN1Q86TM6 617 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 TRIM42Q8IWZ5 723 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 ARFGAP2Q8N6H7 521 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 CCNYL1Q8N7R7 359 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 ZNF473Q8WTR7 871 aaKnown RBP13.63□□□□□ -0.23
SSBP1-201ENST00000265304 SMIM10Q96HG1 83 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 OR6C1Q96RD1 312 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 SLC6A16Q9GZN6 736 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 ASCL3Q9NQ33 180 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 DKK4Q9UBT3 224 aa13.63□□□□□ -0.23
SSBP1-201ENST00000265304 URB1O60287 2271 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms