RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CRYBA2P53672 197 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 KCNJ10P78508 379 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 TBCEQ15813 527 aaPredicted RBP16.87■□□□□ 0.29
TRAM1-201ENST00000262213 LRRC73Q5JTD7 316 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 SPANXN2Q5MJ10 180 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 FRG2Q64ET8 278 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 VRK3Q8IV63 474 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 C7orf34Q96L11 122 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 FRG2BQ96QU4 278 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 COPS8Q99627 209 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 NIPSNAP1Q9BPW8 284 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 HIST1H2AGP0C0S8 130 aaPredicted RBP16.86■□□□□ 0.29
TRAM1-201ENST00000262213 HOXB6P17509 224 aaKnown RBP16.86■□□□□ 0.29
TRAM1-201ENST00000262213 HIST1H2ADP20671 130 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 GGT2P36268 569 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 SPIBQ01892 262 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 IRF5Q13568 498 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 ZNF648Q5T619 568 aaPredicted RBP16.86■□□□□ 0.29
TRAM1-201ENST00000262213 LRRC66Q68CR7 880 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 CYP4Z2PQ8N1L4 340 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 NXPE1Q8N323 547 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 GPR26Q8NDV2 337 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 OR10G2Q8NGC3 310 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 HIST1H2AHQ96KK5 128 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 SPATA17Q96L03 361 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 CEP19Q96LK0 163 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 HIST1H2AJQ99878 128 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 H2AFJQ9BTM1 129 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 CEP44Q9C0F1 390 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.86■□□□□ 0.293e-7■■■■■ 31.3
TRAM1-201ENST00000262213 OGDHLQ9ULD0 1010 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 DUSP12Q9UNI6 340 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 ZNF840PA6NDX5 716 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 AP3D1O14617 1153 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 CELF2O95319 508 aaKnown RBP16.86■□□□□ 0.29
TRAM1-201ENST00000262213 APOA1P02647 267 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 PRPS1L1P21108 318 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 BCL2L1Q07817 233 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 ERICH5Q6P6B1 374 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 TUBA3EQ6PEY2 450 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 TMEM173Q86WV6 379 aaPredicted RBP16.86■□□□□ 0.29
TRAM1-201ENST00000262213 ZSWIM9Q86XI8 627 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 OR9Q2Q8NGE9 314 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 GTPBP3Q969Y2 492 aaKnown RBP16.86■□□□□ 0.29
TRAM1-201ENST00000262213 DMRTB1Q96MA1 342 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 OR5M11Q96RB7 305 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 CLSTN3Q9BQT9 956 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 TSEN34Q9BSV6 310 aaKnown RBP16.86■□□□□ 0.29
TRAM1-201ENST00000262213 EMILIN2Q9BXX0 1053 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 EXOSC4Q9NPD3 245 aaKnown RBP16.86■□□□□ 0.29
TRAM1-201ENST00000262213 ADPRHL2Q9NX46 363 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 IMPAD1Q9NX62 359 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 KCTD5Q9NXV2 234 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 PCDHGB3Q9Y5G1 929 aa16.86■□□□□ 0.29
TRAM1-201ENST00000262213 KCNE1BA0A087WTH5 132 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 TMEM189-UBE2V1I3L0A0 370 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 IDH3BO43837 385 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 KIAA0513O60268 411 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 MTX2O75431 263 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 TRBC1P01850 177 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 RGS6P49758 472 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 ZNF45Q02386 682 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 PPIGQ13427 754 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRAM1-201ENST00000262213 MRPL58Q14197 206 aaKnown RBP16.85■□□□□ 0.29
TRAM1-201ENST00000262213 TSTQ16762 297 aaKnown RBP16.85■□□□□ 0.29
TRAM1-201ENST00000262213 IQCCQ4KMZ1 466 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 THOC7Q6I9Y2 204 aaKnown RBP16.85■□□□□ 0.29
TRAM1-201ENST00000262213 ADNP2Q6IQ32 1131 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 MACC1Q6ZN28 852 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 APCDD1Q8J025 514 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 NAGSQ8N159 534 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 GPR156Q8NFN8 814 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 RDH14Q9HBH5 336 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 MS4A12Q9NXJ0 267 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 PDZK1P1A8MUH7 402 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 RGS5O15539 181 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 MRPS14O60783 128 aaKnown RBP16.85■□□□□ 0.29
TRAM1-201ENST00000262213 SCN2BO60939 215 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 AOAHP28039 575 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 SPAM1P38567 509 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 CRATP43155 626 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 DEFA1P59665 94 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 DEFA3P59666 94 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 CDH18Q13634 790 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 POP5Q969H6 163 aaKnown RBP16.85■□□□□ 0.29
TRAM1-201ENST00000262213 CCM2Q9BSQ5 444 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 HTATIP2Q9BUP3 242 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 ZNF226Q9NYT6 803 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 UGT2A1Q9Y4X1 527 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 LYVE1Q9Y5Y7 322 aa16.85■□□□□ 0.29
TRAM1-201ENST00000262213 LOC110117498-PIK3R3F6TDL0 507 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 J3KTA2 159 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 PCDH7O60245 1069 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 KRT75O95678 551 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 AZGP1P25311 298 aaKnown RBP16.84■□□□□ 0.29
TRAM1-201ENST00000262213 UGT2B15P54855 530 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 OR2B6P58173 313 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 EXOC3L2Q2M3D2 409 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 HKDC1Q2TB90 917 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 CHST9Q7L1S5 443 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms