RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 GPC6Q9Y625 555 aaPredicted RBP14□□□□□ -0.17
SFSWAP-201ENST00000261674 KCNK5O95279 499 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 CRATP43155 626 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 PCYT1AP49585 367 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 PRSS36Q5K4E3 855 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 CALHM3Q86XJ0 350 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 ING5Q8WYH8 240 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 P2RY13Q9BPV8 354 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 C2orf49Q9BVC5 232 aaPredicted RBP14□□□□□ -0.17
SFSWAP-201ENST00000261674 MARCH7Q9H992 704 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 TPT1P8Q9HAU6 139 aa14□□□□□ -0.17
SFSWAP-201ENST00000261674 PATJQ8NI35 1801 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 FZD6O60353 706 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 CKMP06732 381 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 ACPPP15309 386 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 LAG3P18627 525 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 HOXA9P31269 272 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 C5orf22Q49AR2 442 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 KDM4DQ6B0I6 523 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 PLEKHG7Q6ZR37 379 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 CHST9Q7L1S5 443 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 CCDC71Q8IV32 467 aaPredicted RBP13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 ZNF461Q8TAF7 563 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 DYNC2LI1Q8TCX1 351 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 SCAMP4Q969E2 229 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 PLD4Q96BZ4 506 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 ZNF300Q96RE9 604 aaPredicted RBP13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 RAD9AQ99638 391 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 ZDHHC6Q9H6R6 413 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 NECTIN3Q9NQS3 549 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 RPS6KA6Q9UK32 745 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 FZD4Q9ULV1 537 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 VWA8A3KMH1 1905 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 LINC01553A4QN01 128 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 PRAMEF4O60810 478 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 GADD45AP24522 165 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 NSG1P42857 185 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 GZMMP51124 257 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 ELAVL2Q12926 359 aaKnown RBP13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 DUOXA1Q1HG43 343 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 HKDC1Q2TB90 917 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 INO80DQ53TQ3 878 aaPredicted RBP13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 PRAMEF9Q5VWM5 478 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 FAM180BQ6P0A1 224 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 MFSD4AQ8N468 514 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 FEVQ99581 238 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 HTATIP2Q9BUP3 242 aa13.99□□□□□ -0.17
SFSWAP-201ENST00000261674 CHD5Q8TDI0 1954 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 HMGA1P17096 107 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 MAPK1P28482 360 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 PTPN6P29350 595 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 STX19Q8N4C7 294 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 OR4K1Q8NGD4 311 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 RERGLQ9H628 205 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 KIAA1522Q9P206 1035 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 A0A1W2PRU2 124 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 HTR3EA5X5Y0 456 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 SAP18O00422 153 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 INPPL1O15357 1258 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 YY2O15391 372 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 SUV39H1O43463 412 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 STSP08842 583 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 GSTT2P0CG29 244 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 GSTT2BP0CG30 244 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 ITGAMP11215 1152 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 EPCAMP16422 314 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 CTSOP43234 321 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 PPP3CCP48454 512 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 RPS3AP61247 264 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 AP1S1P61966 158 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 IL18R1Q13478 541 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 NAE1Q13564 534 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 UGT8Q16880 541 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 TIGD6Q17RP2 521 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 LRIF1Q5T3J3 769 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 SYT6Q5T7P8 510 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 TMEM53Q6P2H8 277 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 DNAJB7Q7Z6W7 309 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 TSPYL5Q86VY4 417 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 CCDC103Q8IW40 242 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 Q8N9G6 341 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 TMEM175Q9BSA9 504 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 GPR83Q9NYM4 423 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 TAS2R16Q9NYV7 291 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 AP3M1Q9Y2T2 418 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 YBX2Q9Y2T7 364 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 YIPF1Q9Y548 306 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 OR56A5P0C7T3 313 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 AMD1P17707 334 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 PBLDP30039 288 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 HOXD12P35452 270 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 CDH12P55289 794 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 MADCAM1Q13477 382 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 CRTC1Q6UUV9 634 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 TMC5Q6UXY8 1006 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 SLC44A2Q8IWA5 706 aaPredicted RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 ZZZ3Q8IYH5 903 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 ENTHD1Q8IYW4 607 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 FAM83FQ8NEG4 500 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms