RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Fbxo36Q9CQ24 188 aa17.97■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gm16286Q9CQX6 220 aa17.97■□□□□ 0.47
Trim71-201ENSMUST00000111816 Mrps33Q9D2R8 106 aa17.97■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gbe1Q9D6Y9 702 aa17.97■□□□□ 0.47
Trim71-201ENSMUST00000111816 Lbx2Q9WUN8 195 aa17.97■□□□□ 0.47
Trim71-201ENSMUST00000111816 Cbx4O55187 551 aa17.97■□□□□ 0.47
Trim71-201ENSMUST00000111816 Cdh12Q5RJH3 794 aa17.97■□□□□ 0.47
Trim71-201ENSMUST00000111816 Ankrd61Q9CQM6 421 aa17.97■□□□□ 0.47
Trim71-201ENSMUST00000111816 Zfp275G3X904 499 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Slc35f4Q8BZK4 485 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Zswim3Q8CFL8 695 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 RbmxQ9WV02 391 aaKnown RBP17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 AlplP09242 524 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 B3gnt6Q3USF0 391 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gnb3Q61011 340 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Sdhaf3Q8BQU3 125 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Unc5aQ8K1S4 898 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Zdhhc21Q9D270 265 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Abhd5Q9DBL9 351 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Slc7a7Q9Z1K8 510 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gm8225D3Z536 292 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Tal1P22091 329 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Coq8bQ566J8 533 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Slitrk5Q810B7 957 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gpr89aQ8BS95 455 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 NdnfQ8C119 568 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Olfr586Q8VH13 317 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Prps2Q9CS42 318 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Nr4a3Q9QZB6 627 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 ChrdQ9Z0E2 948 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gm14744B1AVU4 173 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Atf6bO35451 699 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Fkbp1aP26883 108 aaKnown RBP17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Pip5k1bP70181 539 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 SynbQ8BI41 618 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Rab31Q921E2 194 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 5430402E10RikQ9D3N5 173 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Tex29Q9DA77 186 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Tmem151bQ68FE7 561 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Coro6Q920M5 471 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Gm5538W4VSP6 401 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Vmn2r70K7N702 854 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Kcns2O35174 477 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Ufd1P70362 307 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Pon3Q62087 354 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Tas2r3Q7TQA7 316 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Paip1Q8VE62 400 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Papd4Q91YI6 484 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Slc25a19Q9DAM5 318 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 NmbrO54799 390 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Rab8aP55258 207 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Ano7Q14AT5 859 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 XkrxQ5GH68 449 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Prokr2Q8K458 381 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Natd1Q9DBW3 110 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Mrpl39Q9JKF7 336 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Ndrg3Q9QYF9 375 aa17.96■□□□□ 0.47
Trim71-201ENSMUST00000111816 Hbb-bh0P04443 147 aa17.96■□□□□ 0.46
Trim71-201ENSMUST00000111816 Colec10Q8CF98 277 aa17.96■□□□□ 0.46
Trim71-201ENSMUST00000111816 Gm266A6H634 200 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Ccdc71lE9Q4T4 218 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Serpina7P61939 418 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Wdr59Q8C0M0 992 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 PiggD3Z3Y1 983 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Zfp938E9Q9G3 579 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Glp1rO35659 463 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Hmx1O70218 332 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Cyp2a4P15392 494 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Glb1l2Q3UPY5 636 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Cdk15Q3V3A1 433 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Fbxl3Q8C4V4 428 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Hbp1Q8R316 516 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 0610009B22RikQ8R3W2 140 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Mitd1Q8VDV8 249 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 RgccQ9DBX1 137 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Slc19a2Q9EQN9 498 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Prox2Q8BII1 593 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Mfsd14bQ8CIA9 507 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Olfr1176Q8VG40 315 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Gfod2Q9CYH5 385 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Zar1lC3VD30 291 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Gm5458L7N219 204 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Fam151bD3YUE4 279 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Tmem109Q3UBX0 243 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Cxcr1Q810W6 351 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Pcdhb4Q91XZ6 784 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Cxxc1Q9CWW7 660 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Zfp955bL7N232 545 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Mtco2P00405 227 aaKnown RBP17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 RxrbP28704 520 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Rps12P63323 132 aaKnown RBP17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Mc1rQ01727 315 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Snx21Q3UR97 363 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 LsampQ8BLK3 341 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Ctxn3Q8BXZ0 80 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Gm5678A0A1B0GRG8 277 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Pm20d2A3KG59 431 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Gm6205E9PZS2 359 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Oaz2O08608 189 aa17.95■□□□□ 0.46
Trim71-201ENSMUST00000111816 Bmp4P21275 408 aa17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms