RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 NoboxQ8VIH1 527 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Trmt10bQ9D075 318 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Dusp12Q9D0T2 339 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Grb14Q9JLM9 538 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Psma6Q9QUM9 246 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Sh3pxd2bA2AAY5 908 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Kcnk1O08581 336 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Lamp1P11438 406 aaKnown RBP13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Apex1P28352 317 aaKnown RBP13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Lingo4Q149C3 593 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 CcnjQ3TZI6 379 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Carns1Q6ZPS2 827 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Tmem168Q91VX9 697 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Prdm9Q96EQ9 843 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 MtapQ9CQ65 283 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Lbx2Q9WUN8 195 aa13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 HnrnpfQ9Z2X1 415 aaKnown RBP13.63□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Vmn2r56E9Q4U5 779 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gp5O08742 567 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Adam19O35674 920 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Pfdn2O70591 154 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Cxcr2P35343 359 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Oaz1P54369 227 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Foxr1Q3UTB7 268 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Sdr9c7Q8K3P0 313 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Zcchc9Q8R1J3 271 aaKnown RBP13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 PyurfQ9D1C3 112 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Myom1Q62234 1667 aaKnown RBP13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Vmn2r102L7N279 857 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 RxrbP28704 520 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 GstcdQ5RL51 634 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Polr2mQ6P6I6 366 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Phf11aQ8BVM9 293 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Pex6Q99LC9 981 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Dtwd1Q9D8U7 304 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Izumo1Q9D9J7 397 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Prl8a8Q9DAS4 241 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Phf11bB4XVQ1 276 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Tsga10ipF7A1F0 157 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Slc7a2P18581 657 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Tead2P48301 445 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 EdnrbP48302 442 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 FpgsP48760 587 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Pea15Q62048 130 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 CochQ62507 552 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Cdh24Q6PFX6 781 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Q8BHB7 409 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Scamp1Q8K021 338 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Col23a1Q8K4G2 532 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gpr37l1Q99JG2 481 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Riok2Q9CQS5 547 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Rai2Q9QVY8 529 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gm33543A0A1B0GSI5 81 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Vmn2r24D3YUI0 854 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Slc22a1O08966 556 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Nsg2P47759 171 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Flt3Q00342 1000 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Abcb7Q61102 752 aaKnown RBP13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Cntn2Q61330 1040 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Ecm1Q61508 559 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Tlx2Q61663 284 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 BpiQ67E05 483 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Npr2Q6VVW5 1047 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Galnt7Q80VA0 657 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 CipcQ8R0W1 432 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Blzf1Q8R2X8 403 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 PpcsQ8VDG5 311 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Olfr722Q8VFC8 308 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Hacd2Q9D3B1 254 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Pus10Q9D3U0 527 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Cers5Q9D6K9 414 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Slco1a4Q9EP96 670 aa13.62□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Galntl6E5D8G1 601 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Tex16F6WNY1 1150 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 MedagQ14BA6 303 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Ntan1Q64311 310 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 ErfeQ6PGN1 340 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Rps27lQ6ZWY3 84 aaKnown RBP13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Ubap2lQ80X50 1107 aaKnown RBP13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Aoc1Q8JZQ5 751 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Tmed4Q8R1V4 227 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Olfr1019Q8VGS3 310 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Scpep1Q920A5 452 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 MlycdQ99J39 492 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Cdkn2aipnlQ9D211 116 aaKnown RBP13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Lmtk3Q5XJV6 1424 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Zc3h13E9Q784 1729 aaKnown RBP13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Vmn2r-ps130A0A140T8U3 855 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Wscd2D4PHA7 571 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Zfp384E9Q1A5 584 aaKnown RBP13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gm8356J3QPD3 205 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Ppef1O35655 650 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Xpnpep1Q6P1B1 623 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Fam181bQ80VF6 417 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Slc36a2Q8BHK3 478 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 MkxQ8BIA3 353 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Slc7a4Q8BLQ7 635 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Mab21l2Q8BPP1 359 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Sertad3Q9ERC3 197 aa13.61□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Slc7a7Q9Z1K8 510 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms