RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ptgr1Q91YR9 329 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 A0A1L1ST33 502 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 9330159F19RikD3Z623 648 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Csnk2a2O54833 350 aaKnown RBP11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 MbP04247 154 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 ThrbP37242 461 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Hoxb13P70321 286 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Fmo5P97872 533 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Teddm2Q208S0 260 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Gm4951Q3UED7 406 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Zdhhc18Q5Y5T2 380 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Prkd1Q62101 918 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Hist2h2abQ64522 130 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Arhgap28Q8BN58 729 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Fam92aQ8BP22 355 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Apbb3Q8R1C9 486 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Ern1Q9EQY0 977 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Rdh11Q9QYF1 316 aa11.53□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Scn9aQ62205 1984 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Trgv2A2J008 116 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Gm20441G3UYJ7 252 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 ThpoP40226 356 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 TesP47226 423 aaKnown RBP11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 E330014E10RikQ3UL33 481 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 D5Ertd577eQ499F0 481 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Rps9Q6ZWN5 194 aaKnown RBP11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Acot4Q8BWN8 421 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Slitrk6Q8C110 840 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Rcor1Q8CFE3 480 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Sh3d19Q91X43 789 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Golm1Q91XA2 393 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Slamf1Q9QUM4 343 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Gm5565A0A0G2JGB2 317 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Gm14139F6ZS36 494 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Lrrc10bG3XA50 292 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Gm20828J3KMI7 228 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Fignl2J3QK54 644 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Dnal1Q05A62 190 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Cd244Q07763 397 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Zfp658Q5PPQ4 887 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Bcap29Q61334 240 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Olfr1036Q7TR85 310 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Avl9Q80U56 649 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Larp4Q8BWW4 719 aaKnown RBP11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Mat2bQ99LB6 334 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Ms4a10Q99N03 267 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Pin1Q9QUR7 165 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Clec2iQ9WVF9 217 aa11.52□□□□□ -0.56
Pcif1-201ENSMUST00000041643 Olfr1164A2AVT5 326 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Arhgap40E9Q6X9 672 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pld3O35405 488 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Uba1Q02053 1058 aaKnown RBP11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ddr1Q03146 911 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Msto1Q2YDW2 556 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zmat1Q3V0C1 714 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Timmdc1Q8BUY5 285 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Lrif1Q8CDD9 755 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr347Q8VGK2 312 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fam192aQ91WE2 254 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Q9D3J9 298 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Izumo2Q9DA16 220 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 NrapQ80XB4 1728 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Nrp2O35375 931 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Syn1O88935 706 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 SrgnP13609 152 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Sox2P48432 319 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc1a5P51912 553 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 FhP97807 507 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tvp23aQ6NVH0 222 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Znf423Q80TS5 1292 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tns4Q8BZ33 696 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fmo9Q8C116 539 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dio3Q91ZI8 304 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Arl4dQ99PE9 201 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Q9CXL3 195 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cmtm6Q9CZ69 183 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fam96aQ9DCL2 160 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 SpastQ9QYY8 614 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Faap100A2ACJ2 879 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ggta1l1A2AUQ7 319 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr1160A2AVT0 319 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc9a5B2RXE2 898 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 4930595D18RikD3Z642 64 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Arg2O08691 354 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 GhrhrP32082 423 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Prdx1P35700 199 aaKnown RBP11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dsc2P55292 902 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 PtnP63089 168 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Clhc1Q5M6W3 596 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 PianpQ6P1B3 278 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Klhl26Q8BGY4 606 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Znf410Q8BKX7 478 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zcchc3Q8BPK2 400 aaKnown RBP11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ttc25Q9D4B2 624 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dnaja2Q9QYJ0 412 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ptdss2Q9Z1X2 473 aa11.52□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Il20rbE9Q9A6 308 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Bbip1J3QMK2 67 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Entpd2O55026 495 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 ChgbP16014 677 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms