RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 CDHR3Q6ZTQ4 885 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 ADGRA1Q86SQ6 560 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 FAM89BQ8N5H3 189 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 OTUB1Q96FW1 271 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-216ENST00000640058 CCDC68Q9H2F9 335 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 TUBB1Q9H4B7 451 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 MTHFD2LQ9H903 347 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-216ENST00000640058 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-216ENST00000640058 PRDM4Q9UKN5 801 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 ZNF318Q5VUA4 2279 aa3.81□□□□□ -1.8
CCDC7-216ENST00000640058 IGHV4-30-2A0A087WSY4 118 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 A8MU10 97 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 K7EQD1 137 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 SPRY1O43609 319 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-216ENST00000640058 SNX3O60493 162 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 RPS6KA5O75582 802 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 KRT33AO76009 404 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 BAG3O95817 575 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 GSRP00390 522 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 CSN3P07498 182 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 SAGP10523 405 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-216ENST00000640058 AOC1P19801 751 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 PCGF2P35227 344 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 NNMTP40261 264 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 CASP2P42575 452 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 CCR3P51677 355 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 OPCMLQ14982 345 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 MS4A18Q3C1V0 323 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 TIPARPQ7Z3E1 657 aaKnown RBP3.8□□□□□ -1.8
CCDC7-216ENST00000640058 CENPVQ7Z7K6 275 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-216ENST00000640058 LRTM2Q8N967 370 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 PROX1Q92786 737 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 KLHL5Q96PQ7 755 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 FEVQ99581 238 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 GPR88Q9GZN0 384 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 PARLQ9H300 379 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 EGLN3Q9H6Z9 239 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 IL17BQ9UHF5 180 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 TRPV2Q9Y5S1 764 aa3.8□□□□□ -1.8
CCDC7-216ENST00000640058 EDDM13A0A1B0GTR0 161 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 SHISA7A6NL88 538 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 SURF4O15260 269 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 ATP5BP06576 529 aaKnown RBP3.79□□□□□ -1.8
CCDC7-216ENST00000640058 GP9P14770 177 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 BCL3P20749 454 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 ASCL1P50553 236 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 DET1Q7L5Y6 550 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 OR4N5Q8IXE1 308 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 TTC30BQ8N4P2 665 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-216ENST00000640058 TCEANCQ8N8B7 351 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 RASGEF1AQ8N9B8 481 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 AVL9Q8NBF6 648 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 TSACCQ96A04 125 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-216ENST00000640058 LINC00615Q96LM1 132 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-216ENST00000640058 MUS81Q96NY9 551 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 PI4K2AQ9BTU6 479 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 NSMCE4AQ9NXX6 385 aa3.79□□□□□ -1.8
CCDC7-216ENST00000640058 A0A1W2PNU3 283 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-216ENST00000640058 GLTPD2A6NH11 291 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 C2CD4DB7Z1M9 353 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 PHF1O43189 567 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-216ENST00000640058 AP5Z1O43299 807 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 TADA2AO75478 443 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 ATP6AP2O75787 350 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 PSMD10O75832 226 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 EPCAMP16422 314 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 MC5RP33032 325 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 CETN2P41208 172 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 ZFP36L2P47974 494 aaKnown RBP3.78□□□□□ -1.8
CCDC7-216ENST00000640058 PTPRCAPQ14761 206 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 ALDH1L2Q3SY69 923 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 EIPR1Q53HC9 387 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 MZT2BQ6NZ67 158 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 GPC2Q8N158 579 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 RYBPQ8N488 228 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-216ENST00000640058 ANKRD13CQ8N6S4 541 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 OR52B6Q8NGF0 335 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 ROBO4Q8WZ75 1007 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 DNAJC4Q9NNZ3 241 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 PIH1D3Q9NQM4 214 aaKnown RBP3.78□□□□□ -1.8
CCDC7-216ENST00000640058 GSN-AS1Q9NRJ2 163 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 HACD3Q9P035 362 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 TBC1D7Q9P0N9 293 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 TXNDC16Q9P2K2 825 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 ANAPC2Q9UJX6 822 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 ELF5Q9UKW6 265 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-216ENST00000640058 FAM169AQ9Y6X4 670 aa3.78□□□□□ -1.8
CCDC7-216ENST00000640058 SLC1A7O00341 560 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 RTCAO00442 366 aaKnown RBP3.77□□□□□ -1.81
CCDC7-216ENST00000640058 PHOX2AO14813 284 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 ECE2O60344 883 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 GALR3O60755 368 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-216ENST00000640058 AADACP22760 399 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 RALGDSQ12967 914 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 SNTB1Q13884 538 aaKnown RBP3.77□□□□□ -1.81
CCDC7-216ENST00000640058 RNF212Q495C1 297 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms