RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TOP3AQ13472 1001 aaPredicted RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 IL18R1Q13478 541 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 SF1Q15637 639 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 MEP1AQ16819 746 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 TMEM26Q6ZUK4 368 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 GPR155Q7Z3F1 870 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ARHGAP22Q7Z5H3 698 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 GRASPQ7Z6J2 395 aaPredicted RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 NLRP8Q86W28 1048 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 CHPFQ8IZ52 775 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 CLECL1Q8IZS7 167 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 C1orf52Q8N6N3 182 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR7G3Q8NG95 312 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR13F1Q8NGS4 319 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ING5Q8WYH8 240 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 NRBF2Q96F24 287 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 DTD2Q96FN9 168 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 COQ10AQ96MF6 247 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 WRAP53Q9BUR4 548 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 GABARAPL1Q9H0R8 117 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 FANCEQ9HB96 536 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 TM9SF3Q9HD45 589 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 LTB4R2Q9NPC1 389 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 IL1RAPQ9NPH3 570 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 WBP1LQ9NX94 342 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 TMEM9Q9P0T7 183 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 TMEFF2Q9UIK5 374 aaPredicted RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 BLOC1S6Q9UL45 172 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ITM2BQ9Y287 266 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 PCDHB11Q9Y5F2 797 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 HEMK1Q9Y5R4 338 aaPredicted RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 KCNE2Q9Y6J6 123 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 YY2O15391 372 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SLC16A6O15403 523 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 NOL3O60936 208 aaKnown RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SEC14L2O76054 403 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ATE1O95260 518 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 C1orf105O95561 183 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ETHE1O95571 254 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CYP17A1P05093 508 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ANXA4P09525 319 aaPredicted RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ITGAMP11215 1152 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ADH5P11766 374 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CEBPBP17676 345 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 GSTM2P28161 218 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 KDELR2P33947 212 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 HPCAL1P37235 193 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 GJA8P48165 433 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ISL1P61371 349 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CD47Q08722 323 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 TUBA3CQ13748 450 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 E2F2Q14209 437 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 BCL7AQ4VC05 210 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SPIN4Q56A73 249 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CPTPQ5TA50 214 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ANXA8L1Q5VT79 327 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF691Q5VV52 312 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR2T5Q6IEZ7 315 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ANKRD26P1Q6NSI1 321 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CAMKMTQ7Z624 323 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 RBM23Q86U06 439 aaKnown RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 PTOV1Q86YD1 416 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 FBXO15Q8NCQ5 510 aaPredicted RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 VPS37AQ8NEZ2 397 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR2T29Q8NH02 315 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 HUS1BQ8NHY5 278 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SPPL3Q8TCT6 385 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CHTF18Q8WVB6 975 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SH3KBP1Q96B97 665 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 REPS1Q96D71 796 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 PHF12Q96QT6 1004 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 DCUN1D5Q9BTE7 237 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SPATA9Q9BWV2 254 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 TPT1P8Q9HAU6 139 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 PRM3Q9NNZ6 103 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 VNN3Q9NY84 501 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CXXC1Q9P0U4 656 aaPredicted RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 BTNL2Q9UIR0 455 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ERVK-11Q9UQG0 969 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 BTBD3Q9Y2F9 522 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 MGAT4DA6NG13 374 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 TRIM64BA6NI03 449 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 GABRR3A8MPY1 467 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF197O14709 1029 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 PRNPP04156 253 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SEMG1P04279 462 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 FABP3P05413 133 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 PPIBP23284 216 aaKnown RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 IGFBP5P24593 272 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 RYKP34925 604 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 GTF2H3Q13889 308 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 VEZF1Q14119 521 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CTU2Q2VPK5 515 aaKnown RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF658BQ4V348 819 aaPredicted RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF697Q5TEC3 545 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 XAF1Q6GPH4 301 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ADNP2Q6IQ32 1131 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CAPN13Q6MZZ7 669 aaPredicted RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 MED27Q6P2C8 311 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SLCO4C1Q6ZQN7 724 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms