RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 AP1S2P56377 157 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 RAB15P59190 212 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 DLX2Q07687 328 aaPredicted RBP14.22□□□□□ -0.13
CDH1-213ENST00000612417 VAC14Q08AM6 782 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 MOGQ16653 247 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 MEP1AQ16819 746 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 PTCHD3Q3KNS1 767 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 CPZQ66K79 652 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 NEK5Q6P3R8 708 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 NEK10Q6ZWH5 1172 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 RASGRP3Q8IV61 690 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 ARL10Q8N8L6 244 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 HIST1H2AHQ96KK5 128 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 TSSK3Q96PN8 268 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 HIST1H2AJQ99878 128 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 H2AFJQ9BTM1 129 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 PSME2Q9UL46 239 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 hCG_2014768A0A024R1R8 64 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 SLC1A7O00341 560 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 UGDHO60701 494 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 C1SP09871 688 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 CYP2A6P11509 494 aaPredicted RBP14.22□□□□□ -0.13
CDH1-213ENST00000612417 GDI1P31150 447 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 BMP8BP34820 402 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 SPINT3P49223 89 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 PLA2G16P53816 162 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 FCHO2Q0JRZ9 810 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 HSPA14Q0VDF9 509 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 ABRQ12979 859 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 FRG2Q64ET8 278 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 PARM1Q6UWI2 310 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 SFTPA1Q8IWL2 248 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 NELL1Q92832 810 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 MUL1Q969V5 352 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 APIPQ96GX9 242 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 RIPOR3Q96MK2 946 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 FRG2BQ96QU4 278 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 PALMDQ9NP74 551 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 LTB4R2Q9NPC1 389 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 TBC1D23Q9NUY8 699 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 DNAJC11Q9NVH1 559 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 TMPRSS11EQ9UL52 423 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 ORC6Q9Y5N6 252 aa14.22□□□□□ -0.13
CDH1-213ENST00000612417 TCF20Q9UGU0 1960 aaKnown RBP14.21□□□□□ -0.13
CDH1-213ENST00000612417 M0QX08 132 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 RFXANKO14593 260 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 KPNA5O15131 536 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 LAMP2P13473 410 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 ATP1B2P14415 290 aaPredicted RBP14.21□□□□□ -0.13
CDH1-213ENST00000612417 TIMP2P16035 220 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 ZNF182P17025 639 aaPredicted RBP14.21□□□□□ -0.13
CDH1-213ENST00000612417 ITIH1P19827 911 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 CYP2A7P20853 494 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 PRPS1L1P21108 318 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 KIR3DL1P43629 444 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.13
CDH1-213ENST00000612417 NEK2P51955 445 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 C21orf58P58505 322 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 ZNF805Q5CZA5 627 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 ANKRD34AQ69YU3 496 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 RFLNAQ6ZTI6 216 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 ZNF551Q7Z340 670 aaPredicted RBP14.21□□□□□ -0.13
CDH1-213ENST00000612417 GPR155Q7Z3F1 870 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 ANKRD46Q86W74 232 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 ZDHHC21Q8IVQ6 265 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 SGCDQ92629 289 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 FKBP10Q96AY3 582 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 TRIT1Q9H3H1 467 aaKnown RBP14.21□□□□□ -0.13
CDH1-213ENST00000612417 PCDH12Q9NPG4 1184 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 GPRC5BQ9NZH0 403 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 PCDHGB1Q9Y5G3 927 aa14.21□□□□□ -0.13
CDH1-213ENST00000612417 PABPN1LA6NDY0 278 aaKnown RBP14.21□□□□□ -0.14
CDH1-213ENST00000612417 UPK3BL1B0FP48 263 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 UPK3BL2E5RIL1 263 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 KPNA3O00505 521 aaPredicted RBP14.21□□□□□ -0.14
CDH1-213ENST00000612417 PRAMEF4O60810 478 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 SEMG1P04279 462 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 GSNP06396 782 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 MYCLP1P12525 358 aaPredicted RBP14.21□□□□□ -0.14
CDH1-213ENST00000612417 JUPP14923 745 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 GJA4P35212 333 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 BNIP3Q12983 259 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 CSTF3Q12996 717 aaKnown RBP14.21□□□□□ -0.14
CDH1-213ENST00000612417 SLC14A1Q13336 389 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 PGS1Q32NB8 556 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 PRAMEF9Q5VWM5 478 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 NOXRED1Q6NXP6 359 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 DOK6Q6PKX4 331 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 SERPINA13PQ6UXR4 307 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 VRK3Q8IV63 474 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 ZC3H7AQ8IWR0 971 aaKnown RBP14.21□□□□□ -0.14
CDH1-213ENST00000612417 SMYD1Q8NB12 490 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 BPIFB6Q8NFQ5 453 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 FGF14Q92915 247 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 LRIG1Q96JA1 1093 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 P2RY13Q9BPV8 354 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 S1PR5Q9H228 398 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 IL1RAPQ9NPH3 570 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 BRWD1Q9NSI6 2320 aa14.21□□□□□ -0.14
CDH1-213ENST00000612417 FAIMQ9NVQ4 179 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms