RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 INSL5Q9Y5Q6 135 aa16.33■□□□□ 0.2
PRKCSH-205ENST00000587327 NUP214P35658 2090 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 IGLV3-16A0A075B6K0 115 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 NUAK1O60285 661 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 WBP4O75554 376 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 ALOX5P09917 674 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 EFNA1P20827 205 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 ITGA1P56199 1179 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 DEFB103AP81534 67 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 PTSQ03393 145 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 NPRL3Q12980 569 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 VRK3Q8IV63 474 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 RNF175Q8N4F7 328 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 OR8J2Q8NGG1 315 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 SIGLEC11Q96RL6 698 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 PITX2Q99697 317 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 SLIRPQ9GZT3 109 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 DNAJC11Q9NVH1 559 aa16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 THUMPD1Q9NXG2 353 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-205ENST00000587327 E9PQ18 207 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 PCDHGA12O60330 932 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 URODP06132 367 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 JUPP14923 745 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 ITPKAP23677 461 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 HALP42357 657 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 CD300CQ08708 224 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 FADDQ13158 208 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 VEZF1Q14119 521 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 IQCCQ4KMZ1 466 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 CPA6Q8N4T0 437 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 ARL14EPQ8N8R7 260 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 OR2AP1Q8NGE2 309 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 VOPP1Q96AW1 172 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 PSD2Q9BQI7 771 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 FAM120CQ9NX05 1096 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 SIRT5Q9NXA8 310 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 SAGE1Q9NXZ1 904 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 OR2A25A4D2G3 310 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 PABPN1LA6NDY0 278 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 CLDN24A6NM45 220 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 TTC34A8MYJ7 566 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 UPK3BL1B0FP48 263 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 UPK3BL2E5RIL1 263 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 GFYI3L273 518 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 DPM1O60762 260 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 COX7A2P14406 83 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 CD36P16671 472 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 CREMQ03060 361 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 CHIT1Q13231 466 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 RFLNAQ6ZTI6 216 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 NCCRP1Q6ZVX7 275 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 FAM217AQ8IXS0 508 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 TCEAL8Q8IYN2 117 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 CADM3Q8N126 398 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 RPL3LQ92901 407 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 MAGEB10Q96LZ2 347 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 EPS8L2Q9H6S3 715 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 IL21Q9HBE4 155 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 ABCB8Q9NUT2 735 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 OSGIN1Q9UJX0 560 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 CLEC4EQ9ULY5 219 aa16.31■□□□□ 0.2
PRKCSH-205ENST00000587327 KRT87PA6NCN2 255 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 CPSF4O95639 269 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 OLFM2O95897 454 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 C9P02748 559 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 MPC1LP0DKB6 136 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 TGFBR2P37173 567 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 CSNK2BP67870 215 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 CAMK2GQ13555 558 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 TXNDC8Q6A555 127 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 PDE12Q6L8Q7 609 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 AHSA2Q719I0 299 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 METTL3Q86U44 580 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 CLECL1Q8IZS7 167 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 SYNPOQ8N3V7 929 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 APH1BQ8WW43 257 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 C7orf34Q96L11 122 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 ATG10Q9H0Y0 220 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 VPS29Q9UBQ0 182 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 PCDHB11Q9Y5F2 797 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 SLC16A5O15375 505 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 YY2O15391 372 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 LCKP06239 509 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 LHCGRP22888 699 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 EPHB3P54753 998 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 AP1S2P56377 157 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 PFN3P60673 137 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 LMAN2Q12907 356 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 CSTF3Q12996 717 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 SP140Q13342 867 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 DNASE1L3Q13609 305 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 UBE2UQ5VVX9 321 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 PLEKHG7Q6ZR37 379 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 USP45Q70EL2 814 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 PAGE2Q7Z2X7 111 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 DDX53Q86TM3 631 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 ENTHD1Q8IYW4 607 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 TPD52L3Q96J77 140 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 HRASLS5Q96KN8 279 aa16.3■□□□□ 0.2
PRKCSH-205ENST00000587327 EPYCQ99645 322 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms