RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 KCNH1O95259 989 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 TCEA1P23193 301 aaKnown RBP9.93□□□□□ -0.82
RFFL-212ENST00000584655 DRD3P35462 400 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 KIR3DL1P43629 444 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 PFN3P60673 137 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 PHC1P78364 1004 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 TPRG1LQ5T0D9 272 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 CAPN13Q6MZZ7 669 aaPredicted RBP9.93□□□□□ -0.82
RFFL-212ENST00000584655 ZC3H14Q6PJT7 736 aaKnown RBP9.93□□□□□ -0.82
RFFL-212ENST00000584655 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 KLHL17Q6TDP4 642 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 ZNF783Q6ZMS7 281 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 ZNF438Q7Z4V0 828 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 TICAM1Q8IUC6 712 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 GALNT13Q8IUC8 556 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 TMEM132CQ8N3T6 1108 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 CGREF1Q99674 301 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 ING2Q9H160 280 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 KCNK12Q9HB15 430 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 IL21RQ9HBE5 538 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 AIG1Q9NVV5 245 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 IRAK3Q9Y616 596 aa9.93□□□□□ -0.82
RFFL-212ENST00000584655 BTN3A3O00478 584 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 SGTAO43765 313 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 PCDH7O60245 1069 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 C6orf47O95873 294 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 DCNP07585 359 aaKnown RBP9.92□□□□□ -0.82
RFFL-212ENST00000584655 CDK3Q00526 305 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 RIPK1Q13546 671 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 TLR1Q15399 786 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 PYCR3Q53H96 274 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 ALG1LQ6GMV1 187 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 TMEM92Q6UXU6 159 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 MACC1Q6ZN28 852 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 GPR149Q86SP6 731 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 XAGE5Q8WWM1 108 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 NELL1Q92832 810 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 ZNF382Q96SR6 550 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 SLC17A9Q9BYT1 436 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 CCDC177Q9NQR7 707 aaPredicted RBP9.92□□□□□ -0.82
RFFL-212ENST00000584655 SPHK1Q9NYA1 384 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 VPS29Q9UBQ0 182 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 STOML2Q9UJZ1 356 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 A0A1W2PP18 115 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 C2CD4DB7Z1M9 353 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 SNUPNO95149 360 aaKnown RBP9.92□□□□□ -0.82
RFFL-212ENST00000584655 CTHP32929 405 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 MTA1Q13330 715 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 PDK3Q15120 406 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 USP53Q70EK8 1073 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 TAF8Q7Z7C8 310 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 OR8K5Q8NH50 307 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 EFHD1Q9BUP0 239 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 ACTL8Q9H568 366 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 ENGP17813 658 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 ATP6V1C1P21283 382 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 SSR2P43308 183 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 ELP6Q0PNE2 266 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 CCNYL2Q5T2Q4 361 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 C17orf64Q86WR6 236 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 OR4A15Q8NGL6 344 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 LCN9Q8WX39 176 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 PPP3R2Q96LZ3 170 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 CLEC1BQ9P126 229 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 TESMINQ9Y4I5 508 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 CCDC88CQ9P219 2028 aa9.92□□□□□ -0.82
RFFL-212ENST00000584655 EVPLLA8MZ36 301 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 ETFAP13804 333 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 SEPHS1P49903 392 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 TAS2R38P59533 333 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 PPP1CAP62136 330 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 HOXC5Q00444 222 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 Q6ZPB1 254 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 SATL1Q86VE3 508 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 IL17RCQ8NAC3 791 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 BIRC7Q96CA5 298 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 CXorf40BQ96DE9 158 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 RIBC2Q9H4K1 309 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 SDR39U1Q9NRG7 319 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 PPT2Q9UMR5 302 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 ZFC3H1O60293 1989 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 FXYD1O00168 92 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 NDUFS4O43181 175 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 FRS3O43559 492 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 MITFO75030 526 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 SNAP29O95721 258 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 CST1P01037 141 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 CTSEP14091 401 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 GRIA2P42262 883 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 CHRNB3Q05901 458 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 LRRC32Q14392 662 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 RPS26P11Q5JNZ5 115 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 LRRTM4Q86VH4 590 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 TRAM1L1Q8N609 369 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 EZH1Q92800 747 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 ECHDC3Q96DC8 303 aa9.91□□□□□ -0.82
RFFL-212ENST00000584655 INSM2Q96T92 566 aaPredicted RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 QRSL1Q9H0R6 528 aaKnown RBP9.91□□□□□ -0.82
RFFL-212ENST00000584655 CORO1CQ9ULV4 474 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms