RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 GRK3P35626 688 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 PIK3CBP42338 1070 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 AQP5P55064 265 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 DAB2P98082 770 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 BTKQ06187 659 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 CSTF3Q12996 717 aaKnown RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 IFT88Q13099 833 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 XKR7Q5GH72 579 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 MYLK4Q86YV6 388 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 TTLQ8NG68 377 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 OR7G3Q8NG95 312 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 RFWD2Q8NHY2 731 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 BAHD1Q8TBE0 780 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 RHBDD1Q8TEB9 315 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 ZNF473Q8WTR7 871 aaKnown RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 THAP11Q96EK4 314 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 C19orf60Q96EN9 201 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 MAELQ96JY0 434 aaKnown RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 CNDP2Q96KP4 475 aaKnown RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 FAM107BQ9H098 131 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 TUBB1Q9H4B7 451 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 ELOVL6Q9H5J4 265 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 BRF2Q9HAW0 419 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 SEMA5BQ9P283 1151 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 HCN4Q9Y3Q4 1203 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 SLC28A1O00337 649 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 SDHDO14521 159 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 FFAR3O14843 346 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 PIP5K1BO14986 540 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 TOX3O15405 576 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 CAPN5O15484 640 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 GPR42O15529 346 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 SKAP2O75563 359 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 JUNP05412 331 aaKnown RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 MYF5P13349 255 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 MAGP20916 626 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 PRPH2P23942 346 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 AHRP35869 848 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 SCTRP47872 440 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 LSSP48449 732 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 IDH3AP50213 366 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 ARFIP2P53365 341 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 RPS15AP62244 130 aaKnown RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 GABPB1Q06547 395 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 ABRAXAS2Q15018 415 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 PDCD2Q16342 344 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 AASDHQ4L235 1098 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 PERM1Q5SV97 790 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 METTL21CQ5VZV1 264 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 IRGCQ6NXR0 463 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 FIGLAQ6QHK4 219 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 NAXDQ8IW45 347 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 GBP7Q8N8V2 638 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 ANKS4BQ8N8V4 417 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 IFI44Q8TCB0 444 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 ACTRT2Q8TDY3 377 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 C10orf82Q8WW14 230 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 SELENOMQ8WWX9 145 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 CCT6BQ92526 530 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 NCSTNQ92542 709 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 METTL2AQ96IZ6 378 aaKnown RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 TRAPPC9Q96Q05 1148 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 CDC6Q99741 560 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 CCDC3Q9BQI4 270 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 CCDC28BQ9BUN5 200 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 NUF2Q9BZD4 464 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 SPNS1Q9H2V7 528 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 RXFP3Q9NSD7 469 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 RIC8BQ9NVN3 520 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 PDP2Q9P2J9 529 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 FTSJ1Q9UET6 329 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 DCTN4Q9UJW0 460 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 PILRAQ9UKJ1 303 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 FIS1Q9Y3D6 152 aa11.52□□□□□ -0.57
CCDC57-216ENST00000582885 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.57
CCDC57-216ENST00000582885 A0A0G2JND7 137 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 C4orf47A7E2U8 309 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 RGS14O43566 566 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 CBFA2T3O75081 653 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 CLEC3AO75596 197 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 CPNE6O95741 557 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 PDYNP01213 254 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 CDH3P22223 829 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 HTR6P50406 440 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 LIMK1P53667 647 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 PPP1CAP62136 330 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 PHEXP78562 749 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 MEF2AQ02078 507 aaPredicted RBP11.51□□□□□ -0.57
CCDC57-216ENST00000582885 CFHR1Q03591 330 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 SMU1Q2TAY7 513 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 TCHHL1Q5QJ38 904 aaPredicted RBP11.51□□□□□ -0.57
CCDC57-216ENST00000582885 NKAIN2Q5VXU1 208 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 FCRL6Q6DN72 434 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 TMEM71Q6P5X7 295 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 ACAD11Q709F0 780 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 LARP4Q71RC2 724 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC57-216ENST00000582885 PRSS42Q7Z5A4 293 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 ADCK2Q7Z695 626 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 TRIM73Q86UV7 250 aa11.51□□□□□ -0.57
CCDC57-216ENST00000582885 KMT5CQ86Y97 462 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms