RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SCAIQ8N9R8 606 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 PROX1Q92786 737 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 C7orf34Q96L11 122 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 KCNC2Q96PR1 638 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 C6orf62Q9GZU0 229 aaPredicted RBP15.13■□□□□ 0.01
NUP88-207ENST00000573584 ATG10Q9H0Y0 220 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 PRDM8Q9NQV8 689 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 DNAJC11Q9NVH1 559 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 KLHL42Q9P2K6 505 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 YY2O15391 372 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 SOCS5O75159 536 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 LAMP1P11279 417 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 AQP1P29972 269 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 TPTEP56180 551 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 PRKCZQ05513 592 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 IQCCQ4KMZ1 466 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 COLEC12Q5KU26 742 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 CRTC1Q6UUV9 634 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 SAPCD2Q86UD0 394 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 LYSMD2Q8IV50 215 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 EPYCQ99645 322 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 P2RY13Q9BPV8 354 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 ELAC1Q9H777 363 aaKnown RBP15.13■□□□□ 0.01
NUP88-207ENST00000573584 CPNE5Q9HCH3 593 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 FAM120CQ9NX05 1096 aaKnown RBP15.13■□□□□ 0.01
NUP88-207ENST00000573584 TSC22D4Q9Y3Q8 395 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 PCDHGB3Q9Y5G1 929 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 MICAL3Q7RTP6 2002 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 ISPDA4D126 451 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 M0R082 166 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 SUV39H1O43463 412 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 OR56A5P0C7T3 313 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 PABPC1P11940 636 aaKnown RBP15.13■□□□□ 0.01
NUP88-207ENST00000573584 RRM2P31350 389 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 UGT2B10P36537 528 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 SEPHS1P49903 392 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 CDC20Q12834 499 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 KCNJ8Q15842 424 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 TIGD6Q17RP2 521 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 VRK3Q8IV63 474 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 SYNPOQ8N3V7 929 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 DBF4BQ8NFT6 615 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 OR8J2Q8NGG1 315 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 SP140LQ9H930 580 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 PSORS1C1Q9UIG5 152 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 MBD1Q9UIS9 605 aaPredicted RBP15.13■□□□□ 0.01
NUP88-207ENST00000573584 FZD4Q9ULV1 537 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 PCDHB11Q9Y5F2 797 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 TBX1O43435 398 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 PRMT3O60678 531 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 GADD45AP24522 165 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 CTSKP43235 329 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 MAPK8P45983 427 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 KCNJ10P78508 379 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 ZXDBP98169 803 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 SELENBP1Q13228 472 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 SF1Q15637 639 aaKnown RBP15.12■□□□□ 0.01
NUP88-207ENST00000573584 LRRC66Q68CR7 880 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 RFLNAQ6ZTI6 216 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 RNF180Q86T96 592 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 SH3KBP1Q96B97 665 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 SLC22A12Q96S37 553 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 GABARAPL3Q9BY60 117 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 ADPRHL2Q9NX46 363 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 VPS29Q9UBQ0 182 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 AGAP5A6NIR3 686 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 METTL15A6NJ78 407 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 E9PQ18 207 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 DBTP11182 482 aaKnown RBP15.12■□□□□ 0.01
NUP88-207ENST00000573584 JUPP14923 745 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 ELNP15502 786 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 SERPINA4P29622 427 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 CRYBA2P53672 197 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 IRF8Q02556 426 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 DDX39BQ13838 428 aaKnown RBP15.12■□□□□ 0.01
NUP88-207ENST00000573584 GPR155Q7Z3F1 870 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 POC5Q8NA72 575 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 MYDGFQ969H8 173 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 MAL2Q969L2 176 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 MTERF1Q99551 399 aaKnown RBP15.12■□□□□ 0.01
NUP88-207ENST00000573584 BBS2Q9BXC9 721 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 BTBD3Q9Y2F9 522 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 ZNF451Q9Y4E5 1061 aa15.12■□□□□ 0.01
NUP88-207ENST00000573584 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 TAF4O00268 1085 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 EIF3FO00303 357 aaPredicted RBP15.11■□□□□ 0.01
NUP88-207ENST00000573584 DPM1O60762 260 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 GSTT2P0CG29 244 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 GSTT2BP0CG30 244 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 FAM124AQ86V42 546 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 CPA6Q8N4T0 437 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 FEVQ99581 238 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 SERTM1A2A2V5 107 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 SAGE2PA6NJ88 616 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 BNIP3LO60238 219 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 NUAK1O60285 661 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 RFPL2O75678 378 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 IGSF6O95976 241 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 SLC19A1P41440 591 aa15.11■□□□□ 0.01
NUP88-207ENST00000573584 PTPN5P54829 565 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms