RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 FAM118BQ9BPY3 351 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 NAT9Q9BTE0 207 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF768Q9H5H4 540 aaKnown RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 TASP1Q9H6P5 420 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 TRPC7Q9HCX4 862 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF334Q9HCZ1 680 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 SNTG1Q9NSN8 517 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ETNK2Q9NVF9 386 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 DKK3Q9UBP4 350 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 VANGL2Q9ULK5 521 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 HPCAL4Q9UM19 191 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 AAR2Q9Y312 384 aaKnown RBP6.96□□□□□ -1.3
CNOT1-222ENST00000570139 SNX5Q9Y5X3 404 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 CPQQ9Y646 472 aa6.96□□□□□ -1.3
CNOT1-222ENST00000570139 ATG2AQ2TAZ0 1938 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 ILVBLA1L0T0 632 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 C17orf100A8MU93 164 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 H0Y626 953 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 DFFAO00273 331 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 SLC9A3R1O14745 358 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 ANXA9O76027 345 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 NEBLO76041 1014 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 HMBSP08397 361 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 ABHD2P08910 425 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 GSTA2P09210 222 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 MYOGP15173 224 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 ATP5DP30049 168 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 OR1E1P30953 314 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 CNR2P34972 360 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 VPS41P49754 854 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 PPP5CP53041 499 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 MFAP4P55083 255 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 SLC10A2Q12908 348 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 FZD5Q13467 585 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 HNRNPDQ14103 355 aaKnown RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 KCNJ11Q14654 390 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 PCLAFQ15004 111 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 TRIP13Q15645 432 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 MPPE1Q53F39 396 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 TEX44Q53QW1 395 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 TSSK4Q6SA08 328 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 KIRREL2Q6UWL6 708 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 TMEM184AQ6ZMB5 413 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 Q6ZSN1 163 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF551Q7Z340 670 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 LINC00523Q86TU6 105 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 LINC00346Q8IVM7 164 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 LGI2Q8N0V4 545 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 NPWQ8N729 165 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 SCAIQ8N9R8 606 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 UBLCP1Q8WVY7 318 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 SGCDQ92629 289 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 EDAQ92838 391 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 RFKQ969G6 155 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 LGMNQ99538 433 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 CCDC77Q9BR77 488 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 ABHD14AQ9BUJ0 271 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 KLHL4Q9C0H6 718 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 STMN4Q9H169 189 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 GBA3Q9H227 469 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 NEUROG2Q9H2A3 272 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 TLE6Q9H808 572 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF446Q9NWS9 450 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 ARL15Q9NXU5 204 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 KLHL8Q9P2G9 620 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 XPO7Q9UIA9 1087 aaKnown RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 AGO1Q9UL18 857 aaKnown RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 PPIEQ9UNP9 301 aaKnown RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 PCDHGB5Q9Y5G0 923 aa6.95□□□□□ -1.3
CNOT1-222ENST00000570139 SIRT4Q9Y6E7 314 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-222ENST00000570139 TRANK1O15050 2925 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 A0A087WUV0 522 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 hCG_1809904A0A1W2PP81 198 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 A0A1W2PPE2 198 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 A0A1W2PR64 198 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 PATE3B3GLJ2 98 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 GOLGA8KD6RF30 607 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 E7ESA3 106 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 CCL16O15467 120 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 NDUFS3O75489 264 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 LUC7L3O95232 432 aaKnown RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 SPDEFO95238 335 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 TTC4O95801 387 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ADAP00813 363 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 RHOCP08134 193 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 CHRM2P08172 466 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 HOXB5P09067 269 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ZSCAN5DPP0CG00 497 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 CCNB1P14635 433 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 EPCAMP16422 314 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 HOXB8P17481 243 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-222ENST00000570139 GABRB1P18505 474 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 PTPN3P26045 913 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 TYK2P29597 1187 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 HSD17B3P37058 310 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 PSG6Q00889 435 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 IFFO1Q0D2I5 559 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 WASHC5Q12768 1159 aa6.94□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF177Q13360 481 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms