RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CA5AP35218 305 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 CPT1AP50416 773 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 RACK1P63244 317 aaKnown RBP15.18■□□□□ 0.02
COMMD4-215ENST00000566843 E2F2Q14209 437 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 OR4F3Q6IEY1 312 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 PDE12Q6L8Q7 609 aaKnown RBP15.18■□□□□ 0.02
COMMD4-215ENST00000566843 NRARPQ7Z6K4 114 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 CFAP52Q8N1V2 620 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 TCAIMQ8N3R3 496 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 GALNT6Q8NCL4 622 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 DENND6BQ8NEG7 585 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 ST13P5Q8NFI4 369 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-215ENST00000566843 C9orf43Q8TAL5 461 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-215ENST00000566843 CHTF18Q8WVB6 975 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 C3orf14Q9HBI5 128 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 TAS2R9Q9NYW1 312 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 CRNNQ9UBG3 495 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-215ENST00000566843 PCDHGA2Q9Y5H1 932 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 AP1M2Q9Y6Q5 423 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 HMX3A6NHT5 357 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 F5H5T6 163 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 AP3D1O14617 1153 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 TLR5O60602 858 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 MAPK1P28482 360 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 KCNJ10P78508 379 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 BEX3Q00994 111 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 PTPRRQ15256 657 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 GNASQ5JWF2 1037 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 C10orf120Q5SQS8 335 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 SYNPOQ8N3V7 929 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 MTFMTQ96DP5 389 aaKnown RBP15.18■□□□□ 0.02
COMMD4-215ENST00000566843 RNF170Q96K19 258 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 SLA2Q9H6Q3 261 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 AMBNQ9NP70 447 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 C14orf119Q9NWQ9 140 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 GPR83Q9NYM4 423 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 MAU2Q9Y6X3 613 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 H3BNC9 293 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 CTDSP2O14595 271 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 SCN2BO60939 215 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ZNF7P17097 686 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ITGA2P17301 1181 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 EPORP19235 508 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 RFX2P48378 723 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 CRISP3P54108 245 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 TIMM50Q3ZCQ8 353 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 PPP2R2DQ66LE6 453 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 NEK5Q6P3R8 708 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ZNF517Q6ZMY9 492 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ATCAYQ86WG3 371 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 RAB43Q86YS6 212 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 GALNT12Q8IXK2 581 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 STX19Q8N4C7 294 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 DEPDC7Q96QD5 511 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 SPON2Q9BUD6 331 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 APOL5Q9BWW9 433 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 CLPBQ9H078 707 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 RAD18Q9NS91 495 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ERVK13-1Q9NX77 482 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 PADI2Q9Y2J8 665 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 KCNE1BA0A087WTH5 132 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 GFRA2O00451 464 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 FPGTO14772 594 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 STK16O75716 305 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 EPN2O95208 641 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ZNF865P0CJ78 1059 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 CTPS1P17812 591 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 CD72P21854 359 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 GRK4P32298 578 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 TNFSF8P32971 234 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 KIR3DL1P43629 444 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 RPS5P46782 204 aaKnown RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 MRPS15P82914 257 aaKnown RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 CAP1Q01518 475 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ST3GAL4Q11206 333 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 BOP1Q14137 746 aaKnown RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 NFE2Q16621 373 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 GGTA1PQ4G0N0 100 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 TSEN54Q7Z6J9 526 aaKnown RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ZNF605Q86T29 641 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 RNF130Q86XS8 419 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 GATAD2AQ86YP4 633 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 DEPDC4Q8N2C3 294 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 FBXO32Q969P5 355 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 FCRL1Q96LA6 429 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 NEDD4LQ96PU5 975 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 SPATA9Q9BWV2 254 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 CDCA4Q9BXL8 241 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ASAH2Q9NR71 780 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 TLR8Q9NR97 1041 aaKnown RBP15.17■□□□□ 0.02
COMMD4-215ENST00000566843 ADPRHL2Q9NX46 363 aa15.17■□□□□ 0.02
COMMD4-215ENST00000566843 OAZ2O95190 189 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 ALDH1A1P00352 501 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 RRM2P31350 389 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 SLC6A4P31645 630 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 HNF4AP41235 474 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 CRYBA2P53672 197 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 WNT3P56703 355 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 GPRC6AQ5T6X5 926 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 PSD4Q8NDX1 1056 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms