RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 TSSK3Q96PN8 268 aa20.92■□□□□ 0.94
SPSB3-208ENST00000566339 PANX1Q96RD7 426 aa20.92■□□□□ 0.94
SPSB3-208ENST00000566339 TMEM106CQ9BVX2 250 aa20.92■□□□□ 0.94
SPSB3-208ENST00000566339 HOXD1Q9GZZ0 328 aa20.92■□□□□ 0.94
SPSB3-208ENST00000566339 SPASTQ9UBP0 616 aa20.92■□□□□ 0.94
SPSB3-208ENST00000566339 BTNL2Q9UIR0 455 aa20.92■□□□□ 0.94
SPSB3-208ENST00000566339 FNDC3AQ9Y2H6 1198 aaKnown RBP20.92■□□□□ 0.94
SPSB3-208ENST00000566339 PCDHB11Q9Y5F2 797 aa20.92■□□□□ 0.94
SPSB3-208ENST00000566339 PRSS21Q9Y6M0 314 aa20.92■□□□□ 0.94
SPSB3-208ENST00000566339 SCN2BO60939 215 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 TRBC1P01850 177 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 HSD3B1P14060 373 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 POLR2EP19388 210 aaKnown RBP20.91■□□□□ 0.94
SPSB3-208ENST00000566339 HSD3B2P26439 372 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 CORO1AP31146 461 aaKnown RBP20.91■□□□□ 0.94
SPSB3-208ENST00000566339 CPSF6Q16630 551 aaKnown RBP eCLIP20.91■□□□□ 0.94
SPSB3-208ENST00000566339 NOXRED1Q6NXP6 359 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 RNF19BQ6ZMZ0 732 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 CAMKMTQ7Z624 323 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 RTN4RL1Q86UN2 441 aaPredicted RBP20.91■□□□□ 0.94
SPSB3-208ENST00000566339 LINC01599Q8WXQ3 324 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 DNASE1L2Q92874 299 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 RPL3LQ92901 407 aaKnown RBP20.91■□□□□ 0.94
SPSB3-208ENST00000566339 LYSMD1Q96S90 227 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 CCDC32Q9BV29 185 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 BOCQ9BWV1 1114 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 IL26Q9NPH9 171 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 ABCB10Q9NRK6 738 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 SACM1LQ9NTJ5 587 aa20.91■□□□□ 0.94
SPSB3-208ENST00000566339 PCGF2P35227 344 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 LIPAP38571 399 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 GJA8P48165 433 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 KCNC3Q14003 757 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 KCNA10Q16322 511 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 SMN1Q16637 294 aaKnown RBP20.9■□□□□ 0.94
SPSB3-208ENST00000566339 CDKN3Q16667 212 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 STEAP3Q658P3 488 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 OR4F3Q6IEY1 312 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 ANKS3Q6ZW76 656 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 DCAF4L2Q8NA75 395 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 PYCR2Q96C36 320 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 REXO4Q9GZR2 422 aaKnown RBP20.9■□□□□ 0.94
SPSB3-208ENST00000566339 CRISPLD1Q9H336 500 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 ELAC1Q9H777 363 aaKnown RBP20.9■□□□□ 0.94
SPSB3-208ENST00000566339 SIAEQ9HAT2 523 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 ZDHHC3Q9NYG2 299 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 POFUT2Q9Y2G5 429 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 ZNF840PA6NDX5 716 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 hCG_2039718K7EN88 272 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 APOA1P02647 267 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 ELNP15502 786 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 ALDH9A1P49189 494 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 TUFMP49411 452 aaKnown RBP20.9■□□□□ 0.94
SPSB3-208ENST00000566339 AP1S2P56377 157 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 WNT3P56703 355 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 IRF3Q14653 427 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 LIPJQ5W064 366 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 FRG2Q64ET8 278 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 TRAF7Q6Q0C0 670 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 ZNF367Q7RTV3 350 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 SNX29P2Q8IUI4 249 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 FRG2BQ96QU4 278 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 TMEM161AQ9NX61 479 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 ARL15Q9NXU5 204 aa20.9■□□□□ 0.94
SPSB3-208ENST00000566339 RUVBL1Q9Y265 456 aaKnown RBP20.9■□□□□ 0.94
SPSB3-208ENST00000566339 PLXNA4Q9HCM2 1894 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 CXorf51AA0A1B0GTR3 108 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 SCAMP3O14828 347 aaKnown RBP20.89■□□□□ 0.93
SPSB3-208ENST00000566339 SUV39H1O43463 412 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 KLKB1P03952 638 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 HIST1H2AGP0C0S8 130 aaPredicted RBP20.89■□□□□ 0.93
SPSB3-208ENST00000566339 JUPP14923 745 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 ITGB6P18564 788 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 EN2P19622 333 aaPredicted RBP20.89■□□□□ 0.93
SPSB3-208ENST00000566339 HIST1H2ADP20671 130 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 SOX6P35712 828 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 ASMTP46597 345 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 MAPK11Q15759 364 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 ANXA8L1Q5VT79 327 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 ZDHHC20Q5W0Z9 365 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 ANKRD46Q86W74 232 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 SETD6Q8TBK2 473 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 ATL1Q8WXF7 558 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 HIST1H2AHQ96KK5 128 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 HIST1H2AJQ99878 128 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 H2AFJQ9BTM1 129 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 DOHHQ9BU89 302 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 RACGAP1Q9H0H5 632 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 CHST8Q9H2A9 424 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 DNAJC11Q9NVH1 559 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 TRAPPC4Q9Y296 219 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 OR51B4Q9Y5P0 310 aa20.89■□□□□ 0.93
SPSB3-208ENST00000566339 A0A075B6Q4 140 aa20.88■□□□□ 0.93
SPSB3-208ENST00000566339 COCHO43405 550 aa20.88■□□□□ 0.93
SPSB3-208ENST00000566339 ATF6P18850 670 aa20.88■□□□□ 0.93
SPSB3-208ENST00000566339 TACR1P25103 407 aa20.88■□□□□ 0.93
SPSB3-208ENST00000566339 ARPP19P56211 112 aa20.88■□□□□ 0.93
SPSB3-208ENST00000566339 KCNJ10P78508 379 aa20.88■□□□□ 0.93
SPSB3-208ENST00000566339 BCL2L1Q07817 233 aa20.88■□□□□ 0.93
SPSB3-208ENST00000566339 DUSP4Q13115 394 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms