RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 PRR35P0CG20 571 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 COX4I1P13073 169 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 ACP5P13686 325 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 HSD3B1P14060 373 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 HSD3B2P26439 372 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 PIK3R1P27986 724 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 PRDX3P30048 256 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 BDKRB1P46663 353 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 CLCNKAP51800 687 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 TBPL1P62380 186 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 IRF8Q02556 426 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 CSTF3Q12996 717 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 ILKQ13418 452 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 NAE1Q13564 534 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 LAPTM5Q13571 262 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 CYLC2Q14093 348 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 FASTKQ14296 549 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 NR6A1Q15406 480 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 C18orf21Q32NC0 220 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 PAGE2BQ5JRK9 111 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 TRIM46Q7Z4K8 759 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 B3GNT8Q7Z7M8 397 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 MYLK4Q86YV6 388 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 TREML1Q86YW5 311 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 DCP2Q8IU60 420 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 LILRA3Q8N6C8 439 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 CCL4L1Q8NHW4 92 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 TSPEARQ8WU66 669 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 OR1E3Q8WZA6 343 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 UBE2E3Q969T4 207 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 MED8Q96G25 268 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 NAF1Q96HR8 494 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 METTL2AQ96IZ6 378 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 PKP4Q99569 1192 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 HAUS8Q9BT25 410 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 EFCAB11Q9BUY7 163 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 SLC25A23Q9BV35 468 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 NRSN2Q9GZP1 204 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 OSGEPL1Q9H4B0 414 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 EHD1Q9H4M9 534 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 ELOVL6Q9H5J4 265 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 PRORYQ9H606 182 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 MVB12BQ9H7P6 319 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 FGF22Q9HCT0 170 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 ASCL3Q9NQ33 180 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 MRPL40Q9NQ50 206 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 TRNAU1APQ9NX07 287 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 NOP53Q9NZM5 478 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 KLQ9UEF7 1012 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 APOBEC3BQ9UH17 382 aaKnown RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 MOSPD1Q9UJG1 213 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 ZNF225Q9UK10 706 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 ZNF490Q9ULM2 529 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-203ENST00000564106 SUFUQ9UMX1 484 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 BTRCQ9Y297 605 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 DYRK1BQ9Y463 629 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 TIMM22Q9Y584 194 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 AK5Q9Y6K8 562 aa9.4□□□□□ -0.9
UBFD1-203ENST00000564106 A0A1B0GTL3 188 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 AGRPO00253 132 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 RSL1D1O76021 490 aaKnown RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 KRT16P08779 473 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 ERGP11308 486 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 ACPPP15309 386 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 MAPK1P28482 360 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 CASP2P42575 452 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 GNPDA1P46926 289 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 HNRNPKP61978 463 aaKnown RBP eCLIP9.39□□□□□ -0.917e-7■□□□□ 11
UBFD1-203ENST00000564106 PHEXP78562 749 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 EMX2Q04743 252 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 CHIT1Q13231 466 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 SRSF6Q13247 344 aaKnown RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 E2F2Q14209 437 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 KRT33BQ14525 404 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 HIST2H2ACQ16777 129 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 C6orf163Q5TEZ5 329 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 TMEM198Q66K66 360 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 HIST2H2AA3Q6FI13 130 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 CAPRIN2Q6IMN6 1127 aaKnown RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 GRHL2Q6ISB3 625 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 LCTLQ6UWM7 567 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 ENPP7Q6UWV6 458 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 C16orf89Q6UX73 402 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 WASH2PQ6VEQ5 465 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 FAM83HQ6ZRV2 1179 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 TMPRSS9Q7Z410 1059 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 FNDC5Q8NAU1 212 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 SNIP1Q8TAD8 396 aaKnown RBP9.39□□□□□ -0.91
UBFD1-203ENST00000564106 ZNF480Q8WV37 535 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 USP7Q93009 1102 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 PYCR2Q96C36 320 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 C3orf30Q96M34 536 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 CDK15Q96Q40 435 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 SGPP1Q9BX95 441 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 TBC1D10AQ9BXI6 508 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 BRINP2Q9C0B6 783 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 ATG10Q9H0Y0 220 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 RASSF4Q9H2L5 321 aa9.39□□□□□ -0.91
UBFD1-203ENST00000564106 TUBB1Q9H4B7 451 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms