RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 NEU3Q9UQ49 428 aa8.31□□□□□ -1.08
CCDC33-209ENST00000560565 PCDHGB2Q9Y5G2 931 aa8.31□□□□□ -1.08
CCDC33-209ENST00000560565 PCDHGA10Q9Y5H3 936 aa8.31□□□□□ -1.08
CCDC33-209ENST00000560565 VPS13AQ96RL7 3174 aa8.31□□□□□ -1.08
CCDC33-209ENST00000560565 TRAV19A0A0A6YYK7 116 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 A0A1W2PRU2 124 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 SH3D21A4FU49 640 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 PABPN1LA6NDY0 278 aaKnown RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 EFCAB10A6NFE3 127 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 E5RI56 91 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 H0Y858 1186 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 STK25O00506 426 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 MUSKO15146 869 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ECI2O75521 394 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 CREG1O75629 220 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 STC2O76061 302 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ALX3O95076 343 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TBX18O95935 607 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 MOCS2O96007 188 aaPredicted RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 PDGFBP01127 241 aaPredicted RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 SLC4A1P02730 911 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 FABP3P05413 133 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 MTHFD2P13995 350 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 CD1EP15812 388 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TCF3P15923 654 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 GJA1P17302 382 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TACR2P21452 398 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 PSMA3P25788 255 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 GABRR2P28476 465 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 WEE1P30291 646 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 RRM2P31350 389 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 NUDT1P36639 197 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 HNF4AP41235 474 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 PTGER3P43115 390 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 SLC15A1P46059 708 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 GNPDA1P46926 289 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 PXNP49023 591 aaPredicted RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 DIO3P55073 304 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 OR4D2P58180 307 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 RUNX1T1Q06455 604 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 OLIG2Q13516 323 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 DNASE1L3Q13609 305 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ZNF235Q14590 738 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ANGPT1Q15389 498 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TEAD2Q15562 447 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 INAVAQ3KP66 663 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ADPRMQ3LIE5 342 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ARHGAP15Q53QZ3 475 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 RUNDC3AQ59EK9 446 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 FAM78AQ5JUQ0 283 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ADGRF1Q5T601 910 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TIGD3Q6B0B8 471 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ZNF783Q6ZMS7 281 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 CHST9Q7L1S5 443 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TMEM150AQ86TG1 271 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 RAB43Q86YS6 212 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ZZZ3Q8IYH5 903 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 SIX5Q8N196 739 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TCAIMQ8N3R3 496 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TTC29Q8NA56 475 aaPredicted RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 DENND6BQ8NEG7 585 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 SMARCD2Q92925 531 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ELSPBP1Q96BH3 223 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TADA1Q96BN2 335 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 PTERQ96BW5 349 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 METTL2AQ96IZ6 378 aaKnown RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ZSWIM3Q96MP5 696 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ZNF583Q96ND8 569 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 EPYCQ99645 322 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 KXD1Q9BQD3 176 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 AMBRA1Q9C0C7 1298 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 SLC39A8Q9C0K1 460 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ATXN3LQ9H3M9 355 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TUBB1Q9H4B7 451 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 MARCH7Q9H992 704 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ZFP14Q9HCL3 533 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 IL1RAPQ9NPH3 570 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 SEMA4BQ9NPR2 832 aaPredicted RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 SLC2A4RGQ9NR83 387 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 KRT84Q9NSB2 600 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 DDX28Q9NUL7 540 aaKnown RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 NLE1Q9NVX2 485 aaPredicted RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 POLR3BQ9NW08 1133 aaPredicted RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 QPCTLQ9NXS2 382 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 TRPS1Q9UHF7 1281 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 LSM7Q9UK45 103 aaKnown RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 NDRG4Q9ULP0 352 aaKnown RBP8.3□□□□□ -1.08
CCDC33-209ENST00000560565 RNF6Q9Y252 685 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 MAN2B2Q9Y2E5 1009 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 MYLKQ15746 1914 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 ASPMQ8IZT6 3477 aa8.3□□□□□ -1.08
CCDC33-209ENST00000560565 RIF1Q5UIP0 2472 aaKnown RBP8.29□□□□□ -1.08
CCDC33-209ENST00000560565 ANKRD34BA5PLL1 514 aa8.29□□□□□ -1.08
CCDC33-209ENST00000560565 BTN3A1O00481 513 aa8.29□□□□□ -1.08
CCDC33-209ENST00000560565 ADAMDEC1O15204 470 aa8.29□□□□□ -1.08
CCDC33-209ENST00000560565 MOSPD3O75425 235 aa8.29□□□□□ -1.08
CCDC33-209ENST00000560565 CLDN11O75508 207 aa8.29□□□□□ -1.08
CCDC33-209ENST00000560565 SLITRK5O94991 958 aa8.29□□□□□ -1.08
CCDC33-209ENST00000560565 MT-CO1P00395 513 aa8.29□□□□□ -1.08
CCDC33-209ENST00000560565 GOT2P00505 430 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms