RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 C3orf18Q9UK00 162 aa11.28□□□□□ -0.6
CKAP4-202ENST00000552828 DOCK10Q96BY6 2186 aa11.28□□□□□ -0.6
CKAP4-202ENST00000552828 AKAP9Q99996 3911 aa11.28□□□□□ -0.6
CKAP4-202ENST00000552828 SNRNP200O75643 2136 aaKnown RBP11.27□□□□□ -0.6
CKAP4-202ENST00000552828 DCHS2Q6V1P9 2916 aa11.27□□□□□ -0.6
CKAP4-202ENST00000552828 TRAV17A0A0B4J275 112 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 ARHGAP10A1A4S6 786 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 OR2A25A4D2G3 310 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 MAP2K7O14733 419 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 SERPINA7P05543 415 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 RPS3P23396 243 aaKnown RBP eCLIP11.27□□□□□ -0.613e-14■■□□□ 12
CKAP4-202ENST00000552828 PSMB5P28074 263 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 CCNFP41002 786 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 PLTPP55058 493 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 EIF3BP55884 814 aaKnown RBP11.27□□□□□ -0.61
CKAP4-202ENST00000552828 SLC7A5Q01650 507 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 CBLBQ13191 982 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 DSG2Q14126 1118 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 CRYMQ14894 314 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 NAA25Q14CX7 972 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 TYSND1Q2T9J0 566 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 MUM1Q2TAK8 710 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 CCSMST1Q4G0I0 132 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 GLE1Q53GS7 698 aaKnown RBP11.27□□□□□ -0.61
CKAP4-202ENST00000552828 ZNF470Q6ECI4 717 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 PTRHD1Q6GMV3 140 aaKnown RBP11.27□□□□□ -0.61
CKAP4-202ENST00000552828 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 FJX1Q86VR8 437 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 RAB42Q8N4Z0 105 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 NR4A3Q92570 626 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 C8orf44Q96CB5 159 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 MVB12AQ96EY5 273 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 CFAP36Q96G28 342 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 C10orf90Q96M02 699 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 PANX3Q96QZ0 392 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 MIPEPQ99797 713 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 FAM167BQ9BTA0 163 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 UNKQ9C0B0 810 aaKnown RBP11.27□□□□□ -0.61
CKAP4-202ENST00000552828 TGIF2Q9GZN2 237 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 INTS10Q9NVR2 710 aaKnown RBP11.27□□□□□ -0.61
CKAP4-202ENST00000552828 GRHL1Q9NZI5 618 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 COPG2Q9UBF2 871 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 GNPTGQ9UJJ9 305 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 CHMP2BQ9UQN3 213 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 KLF2Q9Y5W3 355 aaPredicted RBP11.27□□□□□ -0.61
CKAP4-202ENST00000552828 NFS1Q9Y697 457 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 TEX264Q9Y6I9 313 aa11.27□□□□□ -0.61
CKAP4-202ENST00000552828 POLQO75417 2590 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 MDC1Q14676 2089 aaKnown RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 NSG1A0A0A6YYJ2 146 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 A0A0J9YVX5 310 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 DYTNA2CJ06 578 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 IDSB3KWA1 339 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 PRSS44E7EML9 344 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 E7ESA3 106 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 H3BMM5 538 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 EIF3HO15372 352 aaKnown RBP eCLIP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 NRP2O60462 931 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 BMP10O95393 424 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 MATN4O95460 622 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 ESR1P03372 595 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 ERGP11308 486 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 POU3F2P20265 443 aaPredicted RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 FBLP22087 321 aaKnown RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 FMO4P31512 558 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 SLC26A3P40879 764 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 ADARP55265 1226 aaKnown RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 ARG2P78540 354 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 CTBP1Q13363 440 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 HSP90AA5PQ58FG0 334 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 VWA2Q5GFL6 755 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 RIPOR1Q6ZS17 1223 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 ANKMY2Q8IV38 441 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 MCEMP1Q8IX19 187 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 ZBED8Q8IZ13 594 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 ARHGEF39Q8N4T4 335 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 NOA1Q8NC60 698 aaKnown RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 GSDMBQ8TAX9 411 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 MAGEC3Q8TD91 643 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 BRIX1Q8TDN6 353 aaKnown RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 PYROXD1Q8WU10 500 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 LPGAT1Q92604 370 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 MOCOSQ96EN8 888 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 ZFYVE21Q9BQ24 234 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 RNF32Q9H0A6 362 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 RUBCNLQ9H714 662 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 PPANQ9NQ55 473 aaKnown RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 IARS2Q9NSE4 1012 aaKnown RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 PLA2G3Q9NZ20 509 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 SPATA7Q9P0W8 599 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 CDC14AQ9UNH5 594 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 CRYL1Q9Y2S2 319 aa11.26□□□□□ -0.61
CKAP4-202ENST00000552828 MRPS2Q9Y399 296 aaKnown RBP11.26□□□□□ -0.61
CKAP4-202ENST00000552828 LOC102723996A0A087X1L8 192 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 IGHV1-45A0A0A0MS14 117 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 KRT87PA6NCN2 255 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 H0YGG7 62 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 PRPF4O43172 522 aaKnown RBP eCLIP11.25□□□□□ -0.61
CKAP4-202ENST00000552828 EIF2S1P05198 315 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms