RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CLK4Q9HAZ1 481 aaKnown RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 DNAJC4Q9NNZ3 241 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 RAB9BQ9NP90 201 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 FANCFQ9NPI8 374 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 CD93Q9NPY3 652 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 SNX6Q9UNH7 406 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 FOXA2Q9Y261 457 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 RNF17Q9BXT8 1623 aaKnown RBP4.01□□□□□ -1.77
SCAF11-210ENST00000547654 UHRF1BP1Q6BDS2 1440 aa4.01□□□□□ -1.77
SCAF11-210ENST00000547654 LRRC7Q96NW7 1537 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 FANCAO15360 1455 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CAMSAP1Q5T5Y3 1602 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CTAGE9A4FU28 777 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 GOLGA6L9A6NEM1 432 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 F8WDY8 70 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 E2F3O00716 465 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 TNFRSF13BO14836 293 aaPredicted RBP4□□□□□ -1.77
SCAF11-210ENST00000547654 TIMM23O14925 209 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 HSPA12AO43301 675 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 PRAF2O60831 178 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 VNN2O95498 520 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CXCL14O95715 111 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 MOCS2O96007 188 aaPredicted RBP4□□□□□ -1.77
SCAF11-210ENST00000547654 KRT6BP04259 564 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 SOX6P35712 828 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 RFX2P48378 723 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 KRT6CP48668 564 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CLCNKAP51800 687 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CLDN20P56880 219 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 GSDMDP57764 484 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 SLC34A1Q06495 639 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 Q0VFX4 171 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CETN1Q12798 172 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 TROAPQ12815 778 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 OVGP1Q12889 678 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 VEZF1Q14119 521 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 MCMDC2Q4G0Z9 681 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 Q5PR19 223 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CCDC183Q5T5S1 534 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 ATAD3BQ5T9A4 648 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 NADSYN1Q6IA69 706 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 C11orf63Q6NUN7 778 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 RGMBQ6NW40 437 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 BTNL8Q6UX41 500 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 ZNF329Q86UD4 541 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 UNC5CLQ8IV45 518 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 AADATQ8N5Z0 425 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 ACVR1CQ8NER5 493 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 OR2AK2Q8NG84 335 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 OR14A16Q8NHC5 309 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 HMGCLL1Q8TB92 370 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CHURC1Q8WUH1 139 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CCDC107Q8WV48 283 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 SLC44A1Q8WWI5 657 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 SELENOMQ8WWX9 145 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 THOC1Q96FV9 657 aaKnown RBP4□□□□□ -1.77
SCAF11-210ENST00000547654 EPSTI1Q96J88 318 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 LRFN5Q96NI6 719 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 QRFPRQ96P65 431 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 CMKLR1Q99788 373 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 ASCL2Q99929 193 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 ERP44Q9BS26 406 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 ZNF577Q9BSK1 485 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 TRIM6Q9C030 488 aaPredicted RBP4□□□□□ -1.77
SCAF11-210ENST00000547654 SLA2Q9H6Q3 261 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 GKN1Q9NS71 199 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 FAM212BQ9NTI7 297 aaPredicted RBP4□□□□□ -1.77
SCAF11-210ENST00000547654 ATAD3AQ9NVI7 634 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 MIOSQ9NXC5 875 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 NPAP1Q9NZP6 1156 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 ERRFI1Q9UJM3 462 aaPredicted RBP4□□□□□ -1.77
SCAF11-210ENST00000547654 TINAGQ9UJW2 476 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 ICAM5Q9UMF0 924 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 KCNJ14Q9UNX9 436 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 RUVBL2Q9Y230 463 aaKnown RBP4□□□□□ -1.77
SCAF11-210ENST00000547654 SNX9Q9Y5X1 595 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 POLR1AO95602 1720 aaPredicted RBP4□□□□□ -1.77
SCAF11-210ENST00000547654 ZMYM4Q5VZL5 1548 aa4□□□□□ -1.77
SCAF11-210ENST00000547654 STRCP1A6NGW2 1772 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 ATXN2Q99700 1313 aaKnown RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 CD109Q6YHK3 1445 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 A0A087WZY1 265 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 MED19A0JLT2 244 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 MACROD2A1Z1Q3 448 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 OR2M5A3KFT3 312 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 CCDC169A6NNP5 214 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 C15orf62A8K5M9 175 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 I6L893 689 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 AP3B1O00203 1094 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 DVL1O14640 695 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 GRID2O43424 1007 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 LDB2O43679 373 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 OR6A2O95222 327 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 PAPSS2O95340 614 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 CXCL10P02778 98 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 PCCBP05166 539 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 ACAA1P09110 424 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 HAPLN1P10915 354 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-210ENST00000547654 SKILP12757 684 aa3.99□□□□□ -1.77
SCAF11-210ENST00000547654 IRF2P14316 349 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms