RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ROGDIQ9GZN7 287 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 ELOVL6Q9H5J4 265 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 SMURF1Q9HCE7 757 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 ADARB2Q9NS39 739 aaKnown RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 KRT87PA6NCN2 255 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 TNFRSF11BO00300 401 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 GFRA2O00451 464 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 SCAMP3O14828 347 aaKnown RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 RGS5O15539 181 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 CYP7B1O75881 506 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 SLC25A14O95258 325 aaPredicted RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 ITGA2P17301 1181 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 GPX2P18283 190 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 CD72P21854 359 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 TNFSF8P32971 234 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 PXNP49023 591 aaPredicted RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 ABRQ12979 859 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 TP53BP2Q13625 1128 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 MED22Q15528 200 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 TSTQ16762 297 aaKnown RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 CCDC58Q4VC31 144 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 MFSD4BQ5TF39 518 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 METTL2BQ6P1Q9 378 aaKnown RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 NEK5Q6P3R8 708 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 MBOAT1Q6ZNC8 495 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 SERPINA9Q86WD7 417 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 C9orf43Q8TAL5 461 aaPredicted RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 TRIM63Q969Q1 353 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 EGLN2Q96KS0 407 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 UROC1Q96N76 676 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 TRNT1Q96Q11 434 aaKnown RBP13.75□□□□□ -0.21
SRP54-202ENST00000546080 BOCQ9BWV1 1114 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 WDR70Q9NW82 654 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 IMPAD1Q9NX62 359 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 VPS4AQ9UN37 437 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 PCDHB5Q9Y5E4 795 aa13.75□□□□□ -0.21
SRP54-202ENST00000546080 A0A075B6Q4 140 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 HMX3A6NHT5 357 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 ARHGAP33O14559 1287 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 SUV39H1O43463 412 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 KDELR3O43731 214 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 KCNJ10P78508 379 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 TEKQ02763 1124 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 IRF3Q14653 427 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 IQCCQ4KMZ1 466 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 FAM124AQ86V42 546 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 ZBTB2Q8N680 514 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 OR10G2Q8NGC3 310 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 GRPEL2Q8TAA5 225 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 CMTM7Q96FZ5 175 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 FUBP3Q96I24 572 aaKnown RBP eCLIP13.74□□□□□ -0.21
SRP54-202ENST00000546080 GPR63Q9BZJ6 419 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 C3orf14Q9HBI5 128 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 LATS2Q9NRM7 1088 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 PLSCR3Q9NRY6 295 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 ZNF226Q9NYT6 803 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 TAS2R16Q9NYV7 291 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 IL17CQ9P0M4 197 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 DUSP12Q9UNI6 340 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 MICAL3Q7RTP6 2002 aa13.74□□□□□ -0.21
SRP54-202ENST00000546080 MEIOCA2RUB1 952 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 EFCAB10A6NFE3 127 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 CCRL2O00421 344 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 NBNO60934 754 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 CPSF4O95639 269 aaKnown RBP13.73□□□□□ -0.21
SRP54-202ENST00000546080 TRAPPC2P0DI81 140 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 TRAPPC2BP0DI82 140 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 CTPS1P17812 591 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 RFX2P48378 723 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 FAM189BP81408 668 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 RING1Q06587 406 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 TWF1Q12792 350 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 VEZF1Q14119 521 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 DMC1Q14565 340 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 FAM151BQ6UXP7 276 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 VN1R5Q7Z5H4 357 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 PLEKHH3Q7Z736 793 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 RBFAQ8N0V3 343 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 CPA6Q8N4T0 437 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 DENND6BQ8NEG7 585 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 APIPQ96GX9 242 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 APOLD1Q96LR9 279 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 MGLLQ99685 303 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 CCM2Q9BSQ5 444 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 AP5M1Q9H0R1 490 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 POFUT2Q9Y2G5 429 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 PCDHGA2Q9Y5H1 932 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 ZFP37Q9Y6Q3 630 aaPredicted RBP13.73□□□□□ -0.21
SRP54-202ENST00000546080 CBX4O00257 560 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 ADAMDEC1O15204 470 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 F11P03951 625 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 YES1P07947 543 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 RPS3P23396 243 aaKnown RBP eCLIP13.73□□□□□ -0.218e-6■■□□□ 12.6
SRP54-202ENST00000546080 HOXC8P31273 242 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 KCNQ1P51787 676 aa13.73□□□□□ -0.21
SRP54-202ENST00000546080 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms