RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 IL17CQ9P0M4 197 aa22.96■■□□□ 1.27
SHD-201ENST00000543264 TDRD15B5MCY1 1934 aaKnown RBP22.95■■□□□ 1.27
SHD-201ENST00000543264 KDELR3O43731 214 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 IGLV3-27P01718 113 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 F11P03951 625 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 TSTQ16762 297 aaKnown RBP22.95■■□□□ 1.26
SHD-201ENST00000543264 ARMC4Q5T2S8 1044 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 MLIPQ5VWP3 458 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 TTC23LQ6PF05 361 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 RAB43Q86YS6 212 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 PAF1Q8N7H5 531 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 OR52J3Q8NH60 311 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 TRNT1Q96Q11 434 aaKnown RBP22.95■■□□□ 1.26
SHD-201ENST00000543264 ZNF226Q9NYT6 803 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 KLK4Q9Y5K2 254 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 TFECO14948 347 aaPredicted RBP22.95■■□□□ 1.26
SHD-201ENST00000543264 NUDT7P0C024 238 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 DMC1Q14565 340 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 IRF3Q14653 427 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 CCDC58Q4VC31 144 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 GNASQ5JWF2 1037 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 ERICH5Q6P6B1 374 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 SLC5A8Q8N695 610 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 PHOX2BQ99453 314 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 RAD9AQ99638 391 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 KATNAL1Q9BW62 490 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 SLC29A3Q9BZD2 475 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 OLA1Q9NTK5 396 aaKnown RBP22.95■■□□□ 1.26
SHD-201ENST00000543264 RLIMQ9NVW2 624 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 PCDHB8Q9UN66 801 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 CFL2Q9Y281 166 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 GRIP1Q9Y3R0 1128 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 PCDHB9Q9Y5E1 797 aa22.95■■□□□ 1.26
SHD-201ENST00000543264 MAGEB17A8MXT2 336 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 TNFRSF11BO00300 401 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 SLITRK5O94991 958 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 GPX2P18283 190 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 OLR1P78380 273 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 SPRYD7Q5W111 196 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 LINGO4Q6UY18 593 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 CDC26Q8NHZ8 85 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 TMCO6Q96DC7 493 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 MS4A12Q9NXJ0 267 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 AFF4Q9UHB7 1163 aaKnown RBP22.94■■□□□ 1.26
SHD-201ENST00000543264 MUTYHQ9UIF7 546 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 KRT87PA6NCN2 255 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 TIE1P35590 1138 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 DDOSTP39656 456 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 ARPP19P56211 112 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 KCNJ10P78508 379 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 ZMAT1Q5H9K5 638 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 CLECL1Q8IZS7 167 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 PADI3Q9ULW8 664 aa22.94■■□□□ 1.26
SHD-201ENST00000543264 ARHGAP33O14559 1287 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 ALX3O95076 343 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 ALPIP09923 528 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 POLR2EP19388 210 aaKnown RBP22.93■■□□□ 1.26
SHD-201ENST00000543264 ZXDBP98169 803 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 FOXD4Q12950 439 aaPredicted RBP22.93■■□□□ 1.26
SHD-201ENST00000543264 FAM209AQ5JX71 171 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 RGMBQ6NW40 437 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 RNF175Q8N4F7 328 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 ZBTB2Q8N680 514 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 ST13P5Q8NFI4 369 aaPredicted RBP22.93■■□□□ 1.26
SHD-201ENST00000543264 SPPL2AQ8TCT8 520 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 SUV39H1O43463 412 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 EPORP19235 508 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 TNFRSF1BP20333 461 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 AZGP1P25311 298 aaKnown RBP22.93■■□□□ 1.26
SHD-201ENST00000543264 RFX2P48378 723 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 CSTF3Q12996 717 aaKnown RBP22.93■■□□□ 1.26
SHD-201ENST00000543264 B3GNT7Q8NFL0 401 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 MAL2Q969L2 176 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 CRELD1Q96HD1 420 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 MGLLQ99685 303 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 CCM2Q9BSQ5 444 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 ASB8Q9H765 288 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 IMPAD1Q9NX62 359 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 FLRT1Q9NZU1 646 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 SLC6A14Q9UN76 642 aa22.93■■□□□ 1.26
SHD-201ENST00000543264 PLK4O00444 970 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 PRAMEF1O95521 474 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 CERS6Q6ZMG9 384 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 FAM9CQ8IZT9 166 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 FLCNQ8NFG4 579 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 EXOSC4Q9NPD3 245 aaKnown RBP22.92■■□□□ 1.26
SHD-201ENST00000543264 CRNNQ9UBG3 495 aaPredicted RBP22.92■■□□□ 1.26
SHD-201ENST00000543264 DUSP12Q9UNI6 340 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 PCDHB5Q9Y5E4 795 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 MEIOCA2RUB1 952 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 AGRPO00253 132 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 CA12O43570 354 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 ZNF865P0CJ78 1059 aaPredicted RBP22.92■■□□□ 1.26
SHD-201ENST00000543264 HNF4AP41235 474 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 PPIGQ13427 754 aaKnown RBP eCLIP22.92■■□□□ 1.26
SHD-201ENST00000543264 NFE2Q16621 373 aaPredicted RBP22.92■■□□□ 1.26
SHD-201ENST00000543264 NEK5Q6P3R8 708 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 SIMC1Q8NDZ2 872 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 OR10G2Q8NGC3 310 aa22.92■■□□□ 1.26
SHD-201ENST00000543264 CNPPD1Q9BV87 410 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms