RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SHMT2P34897 504 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 DCTP40126 519 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 ASMTP46597 345 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 RPS13P62277 151 aaKnown RBP13.52□□□□□ -0.25
LIMK1-208ENST00000538333 SPIN4Q56A73 249 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 CATSPEREQ5SY80 951 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 CCNYL2Q5T2Q4 361 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 MED27Q6P2C8 311 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 GALNT18Q6P9A2 607 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 PTOV1Q86YD1 416 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 ADHFE1Q8IWW8 467 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 ZZZ3Q8IYH5 903 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 SYTL1Q8IYJ3 562 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 EID3Q8N140 333 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 TERB1Q8NA31 727 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 OR5K1Q8NHB7 308 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 STARD8Q92502 1023 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 FGF13Q92913 245 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 SDCCAG3Q96C92 435 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 ZNF514Q96K75 400 aaPredicted RBP13.52□□□□□ -0.25
LIMK1-208ENST00000538333 PHF12Q96QT6 1004 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 MBOAT4Q96T53 435 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 DUSP26Q9BV47 211 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 ANTXRLA6NF34 631 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 LZTS3O60299 673 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 SH3BGRLO75368 114 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ANXA4P09525 319 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ZNF8P17098 575 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ACADLP28330 430 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 CCR3P51677 355 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 PNLIPRP1P54315 467 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 TAP2Q03519 686 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 VMACQ2NL98 169 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 CPZQ66K79 652 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ANKRD34AQ69YU3 496 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ZCCHC8Q6NZY4 707 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 SPESP1Q6UW49 350 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ZNF621Q6ZSS3 439 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ERN2Q76MJ5 926 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 C11orf96Q7Z7L8 435 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 LAS2Q8IYD9 372 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 LMNTD1Q8N9Z9 388 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ST13P5Q8NFI4 369 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 OR10Q1Q8NGQ4 319 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 OR9A1PQ8NGU1 263 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 CDC26Q8NHZ8 85 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 SH3KBP1Q96B97 665 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 PPP1R16AQ96I34 528 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 HIC2Q96JB3 615 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 RBM4BQ9BQ04 359 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 RBM4Q9BWF3 364 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 AMBRA1Q9C0C7 1298 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 DPEP2Q9H4A9 486 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 GPR34Q9UPC5 381 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 EXO1Q9UQ84 846 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 PCYT1BQ9Y5K3 369 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 GMEB1Q9Y692 573 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 C1orf226A1L170 272 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 GNGT2O14610 69 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 POP7O75817 140 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 IDSP22304 550 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 TIA1P31483 386 aaKnown RBP eCLIP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 HLCSP50747 726 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 VAC14Q08AM6 782 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 PPP1R8Q12972 351 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 DYNC1I2Q13409 638 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 NFE2L1Q14494 772 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 OR2L2Q8NH16 312 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 TBC1D20Q96BZ9 403 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 COQ8BQ96D53 544 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 NPLQ9BXD5 320 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 ITM2CQ9NQX7 267 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 FAM118AQ9NWS6 357 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 SIRT5Q9NXA8 310 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 BTNL2Q9UIR0 455 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 HCN2Q9UL51 889 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 SAMD4AQ9UPU9 718 aaKnown RBP13.51□□□□□ -0.25
LIMK1-208ENST00000538333 MAPRE3Q9UPY8 281 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 PCDHB11Q9Y5F2 797 aa13.51□□□□□ -0.25
LIMK1-208ENST00000538333 GRXCR1A8MXD5 290 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 FOXE1O00358 373 aaPredicted RBP13.5□□□□□ -0.25
LIMK1-208ENST00000538333 NOBOXO60393 691 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 CPSF4O95639 269 aaKnown RBP13.5□□□□□ -0.25
LIMK1-208ENST00000538333 SEMG1P04279 462 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 CA3P07451 260 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 FCARP24071 287 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 ELK4P28324 431 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 PIGAP37287 484 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 IL12RB1P42701 662 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 EPS8Q12929 822 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 GPM6BQ13491 265 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 GTF2H3Q13889 308 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 HKDC1Q2TB90 917 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 ZBED5Q49AG3 693 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 C10orf62Q5T681 223 aaPredicted RBP13.5□□□□□ -0.25
LIMK1-208ENST00000538333 CPTPQ5TA50 214 aa13.5□□□□□ -0.25
LIMK1-208ENST00000538333 FAM109BQ6ICB4 259 aaPredicted RBP13.5□□□□□ -0.25
LIMK1-208ENST00000538333 ERICH5Q6P6B1 374 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms