RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ATP13A1Q9HD20 1204 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZSCAN32Q9NX65 697 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PCDHGB5Q9Y5G0 923 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 WWP2O00308 870 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 NME4O00746 187 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MITFO75030 526 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 TRBC1P01850 177 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 FPR1P21462 350 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 TBX4P57082 545 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 BTG1P62324 171 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GALEQ14376 348 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 POU4F3Q15319 338 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 FAM205BPQ63HN1 556 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 LRRC66Q68CR7 880 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 DOK6Q6PKX4 331 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CCDC190Q86UF4 302 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF366Q8N895 744 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SMARCD1Q96GM5 515 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CLSTN3Q9BQT9 956 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 C1QTNF1Q9BXJ1 281 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ABCB8Q9NUT2 735 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 RIMKLBQ9ULI2 386 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PCDHGA8Q9Y5G5 932 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 RNF215Q9Y6U7 377 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SH3D21A4FU49 640 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 HLA-EP13747 358 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 AGXTP21549 392 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 AXLP30530 894 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 TGFBR2P37173 567 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ASPAP45381 313 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 OMPP47874 163 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 HCAR3P49019 387 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 HERVK_113P63132 956 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 FPGSQ05932 587 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CAMK2GQ13555 558 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CDH18Q13634 790 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CLLU1Q5K131 121 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CAPN13Q6MZZ7 669 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF516Q92618 1163 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 S100PBPQ96BU1 408 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 KCTD7Q96MP8 289 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 IL4I1Q96RQ9 567 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 TCEAL7Q9BRU2 100 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ERVK-6Q9BXR3 956 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MED9Q9NWA0 146 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 HCN4Q9Y3Q4 1203 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 COL2A1P02458 1487 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 APOC1P02654 83 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 DNAJA1P31689 397 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MAGEA11P43364 429 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 KIR3DL1P43629 444 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GBX2P52951 348 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ATP13A5Q4VNC0 1218 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 KIAA1614Q5VZ46 1190 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 NCBP2-AS2Q69YL0 99 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GDPD3Q7L5L3 318 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 FAM217AQ8IXS0 508 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 STK40Q8N2I9 435 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 RAB42Q8N4Z0 105 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SHKBP1Q8TBC3 707 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 C1QTNF7Q9BXJ2 289 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 RSPH9Q9H1X1 276 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PCDHB16Q9NRJ7 776 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 INTS7Q9NVH2 962 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MED11Q9P086 117 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SLC2A6Q9UGQ3 507 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CLDN5O00501 218 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CHST10O43529 356 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 KIAA0513O60268 411 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ITPKAP23677 461 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CLCNKBP51801 687 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PRKAG1P54619 331 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 TSPAN5P62079 268 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 EMX2Q04743 252 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZBTB37Q5TC79 503 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 HSDL2Q6YN16 418 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MOB2Q70IA6 237 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 LARP4Q71RC2 724 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF534Q76KX8 674 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MARCH9Q86YJ5 346 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 TBC1D19Q8N5T2 526 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 DENND6BQ8NEG7 585 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 FBXO32Q969P5 355 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZC3HAV1LQ96H79 300 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 RPL10LQ96L21 214 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 RAD9AQ99638 391 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SEMA3CQ99985 751 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 DPAGT1Q9H3H5 408 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZBTB20Q9HC78 741 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 HCN3Q9P1Z3 774 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 DNMT3BQ9UBC3 853 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 HMGXB4Q9UGU5 601 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CYB5R1Q9UHQ9 305 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MAP4K5Q9Y4K4 846 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SNX10Q9Y5X0 201 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PTGDR2Q9Y5Y4 395 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SSC5DA1L4H1 1573 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CASTOR2A6NHX0 329 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 ANKDD1BA6NHY2 528 aa5.24□□□□□ -1.57
PTPRD-213ENST00000537002 TLR4O00206 839 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms