RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ITGA5P08648 1049 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 THRAP10827 490 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 HGFP14210 728 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ITGB6P18564 788 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 PGAM1P18669 254 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ITIH1P19827 911 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 OGNP20774 298 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 RPS3P23396 243 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 IVDP26440 423 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 PDHA2P29803 388 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CCR7P32248 378 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CSTF2P33240 577 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 BCL6P41182 706 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CAPZBP47756 277 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 LEPRP48357 1165 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CD151P48509 253 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CSE1LP55060 971 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 SUMO3P55854 103 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 EIF3BP55884 814 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ERVPABLB-1P60509 514 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 MRPS25P82663 173 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 HSPA14Q0VDF9 509 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CALCOCO2Q13137 446 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 SCARB2Q14108 478 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 C16orf72Q14CZ0 275 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMED2Q15363 201 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 TYSND1Q2T9J0 566 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZNF658BQ4V348 819 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CPZQ66K79 652 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZNF470Q6ECI4 717 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ARMC6Q6NXE6 501 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 KLHL17Q6TDP4 642 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 NAPRTQ6XQN6 538 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 FAM129CQ86XR2 697 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CILP2Q8IUL8 1156 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 KRT222Q8N1A0 295 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 AGGF1Q8N302 714 aaeCLIP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 DTWD1Q8N5C7 304 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 GALNT6Q8NCL4 622 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ACVR1CQ8NER5 493 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 GABPB2Q8TAK5 448 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 GSDMBQ8TAX9 411 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 STT3BQ8TCJ2 826 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CALML6Q8TD86 181 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ASZ1Q8WWH4 475 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 LCN9Q8WX39 176 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 THAP4Q8WY91 577 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 LPGAT1Q92604 370 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 TFGQ92734 400 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZUFSPQ96AP4 578 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 SDCCAG3Q96C92 435 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 PRR11Q96HE9 360 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 TGM7Q96PF1 710 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 EBNA1BP2Q99848 306 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 NAT9Q9BTE0 207 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 JAM3Q9BX67 310 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CARD6Q9BX69 1037 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 PAIP1Q9H074 479 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 P2RY12Q9H244 342 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 OR52A5Q9H2C5 316 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 GSX1Q9H4S2 264 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 CXorf56Q9H5V9 222 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 KIR3DX1Q9H7L2 352 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 MVB12BQ9H7P6 319 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 ASCL3Q9NQ33 180 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 INTS10Q9NVR2 710 aaKnown RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 IL1RAPL1Q9NZN1 696 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 OGFRQ9NZT2 677 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 MAN2B2Q9Y2E5 1009 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 COA3Q9Y2R0 106 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 SNX24Q9Y343 169 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 FAM169AQ9Y6X4 670 aa5.6□□□□□ -1.51
HMGB1P42-201ENST00000532126 MN1Q10571 1320 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 SLC5A10A0PJK1 596 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 OR6C74A6NCV1 312 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 OR5K3A6NET4 321 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 EFCAB7A8K855 629 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CDRT15L2A8MXV6 281 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 KIF2AO00139 706 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 LCE2BO14633 110 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 RAD51CO43502 376 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 TLX3O43711 291 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 BANF1O75531 89 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 TSPAN9O75954 239 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 TTC4O95801 387 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 C9P02748 559 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 RPN2P04844 631 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ANKRD34CP0C6C1 535 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 KITP10721 976 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CCL4P13236 92 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 STMN1P16949 149 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CHRM3P20309 590 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 AOAHP28039 575 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ACADLP28330 430 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 FMO4P31512 558 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ELK3P41970 407 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 SLC1A2P43004 574 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 KIR3DL1P43629 444 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 RPL21P46778 160 aaKnown RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ADARP55265 1226 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms