RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 ETV6P41212 452 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 KIR3DL1P43629 444 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 SGSHP51688 502 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 ARPC4P59998 168 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 KCNJ10P78508 379 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 STARD3Q14849 445 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 MED22Q15528 200 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 TSTQ16762 297 aaKnown RBP11.97□□□□□ -0.49
PCM1-203ENST00000517545 TBRG1Q3YBR2 411 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 ZNF648Q5T619 568 aaPredicted RBP11.97□□□□□ -0.49
PCM1-203ENST00000517545 ZNF517Q6ZMY9 492 aaPredicted RBP11.97□□□□□ -0.49
PCM1-203ENST00000517545 PLEKHH3Q7Z736 793 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 STK40Q8N2I9 435 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 NELL1Q92832 810 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 COL21A1Q96P44 957 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 NIPSNAP1Q9BPW8 284 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 MAGEH1Q9H213 219 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 PLCXD1Q9NUJ7 323 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 NPAP1Q9NZP6 1156 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 PCDHB9Q9Y5E1 797 aa11.97□□□□□ -0.49
PCM1-203ENST00000517545 PNMA8CA0A1B0GUJ8 204 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 MYADML2A6NDP7 307 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 H7C0S8 307 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 RGS5O15539 181 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 STK16O75716 305 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 KRT6AP02538 564 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 KRT6BP04259 564 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 HOXC8P31273 242 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 HOXD11P31277 338 aaPredicted RBP11.96□□□□□ -0.49
PCM1-203ENST00000517545 KRT6CP48668 564 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 RGS4P49798 205 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 ARPP19P56211 112 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 E2F2Q14209 437 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 SF1Q15637 639 aaKnown RBP11.96□□□□□ -0.49
PCM1-203ENST00000517545 ZXDCQ2QGD7 858 aaPredicted RBP11.96□□□□□ -0.49
PCM1-203ENST00000517545 SMUG1Q53HV7 270 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 Q5BKY6 102 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 ZNF280BQ86YH2 543 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 CDC26Q8NHZ8 85 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 POP5Q969H6 163 aaKnown RBP11.96□□□□□ -0.49
PCM1-203ENST00000517545 TESCQ96BS2 214 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 TRNT1Q96Q11 434 aaKnown RBP11.96□□□□□ -0.49
PCM1-203ENST00000517545 TSEN34Q9BSV6 310 aaKnown RBP11.96□□□□□ -0.49
PCM1-203ENST00000517545 BEX2Q9BXY8 128 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 ADGRE3Q9BY15 652 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 GPR63Q9BZJ6 419 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 TLR8Q9NR97 1041 aaKnown RBP11.96□□□□□ -0.49
PCM1-203ENST00000517545 AFF4Q9UHB7 1163 aaKnown RBP11.96□□□□□ -0.49
PCM1-203ENST00000517545 PADI3Q9ULW8 664 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 NOD1Q9Y239 953 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 PLXNA4Q9HCM2 1894 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 EPN2O95208 641 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 PRAMEF1O95521 474 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 TYMPP19971 482 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 SOX6P35712 828 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 TGM4P49221 684 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 CPT1AP50416 773 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 BAK1Q16611 211 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 CCL14Q16627 93 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 DUOXA1Q1HG43 343 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 FAM214AQ32MH5 1076 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 GNASQ5JWF2 1037 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 LRRC66Q68CR7 880 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 ZNF605Q86T29 641 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 CHCHD4Q8N4Q1 142 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 PIK3R3Q92569 461 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 ZFYVE19Q96K21 471 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 PHOX2BQ99453 314 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 CCM2Q9BSQ5 444 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 MMP28Q9H239 520 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 ELOVL6Q9H5J4 265 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 MS4A12Q9NXJ0 267 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 GPSM3Q9Y4H4 160 aa11.96□□□□□ -0.49
PCM1-203ENST00000517545 H3BM21 787 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 H3BNC9 293 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 KDELR3O43731 214 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 OPN1SWP03999 348 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 SLC10A3P09131 477 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 GPX2P18283 190 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 CASP9P55211 416 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 PURAQ00577 322 aaKnown RBP11.96□□□□□ -0.5
PCM1-203ENST00000517545 TAB1Q15750 504 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 B3GNT7Q8NFL0 401 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 C8orf48Q96LL4 319 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 MCCC1Q96RQ3 725 aaPredicted RBP11.96□□□□□ -0.5
PCM1-203ENST00000517545 RAD9AQ99638 391 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 EPYCQ99645 322 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 PCDHB5Q9Y5E4 795 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 PCDHB1Q9Y5F3 818 aa11.96□□□□□ -0.5
PCM1-203ENST00000517545 CFAP20Q9Y6A4 193 aaKnown RBP11.96□□□□□ -0.5
PCM1-203ENST00000517545 MAGEB17A8MXT2 336 aa11.95□□□□□ -0.5
PCM1-203ENST00000517545 GAPDHSO14556 408 aaPredicted RBP11.95□□□□□ -0.5
PCM1-203ENST00000517545 GPX5O75715 221 aa11.95□□□□□ -0.5
PCM1-203ENST00000517545 POU2F1P14859 743 aa11.95□□□□□ -0.5
PCM1-203ENST00000517545 GABRB1P18505 474 aa11.95□□□□□ -0.5
PCM1-203ENST00000517545 WNT3P56703 355 aa11.95□□□□□ -0.5
PCM1-203ENST00000517545 GALK2Q01415 458 aa11.95□□□□□ -0.5
PCM1-203ENST00000517545 UGT8Q16880 541 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms