RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ISY1Q9ULR0 285 aaKnown RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF521Q96K83 1311 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 C2orf92A0A1B0GVN3 265 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 ANKDD1BA6NHY2 528 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 TULP2O00295 520 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 ATP6V0E1O15342 81 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 STAM2O75886 525 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 YES1P07947 543 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 SERPINF2P08697 491 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 SBK2P0C263 348 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 SP9P0CG40 484 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 IGHV4-38-2P0DP08 117 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 AREGP15514 252 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CYP3A5P20815 502 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CDH3P22223 829 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 DGKAP23743 735 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 ASMTP46597 345 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CLCN4P51793 760 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CLDN17P56750 224 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 SLC3A1Q07837 685 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CETN1Q12798 172 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 DMP1Q13316 513 aaPredicted RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 MSLNQ13421 630 aaPredicted RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 PDE7AQ13946 482 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 NONOQ15233 471 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 SF3B4Q15427 424 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 TAF13Q15543 124 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CCDC142Q17RM4 750 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 PHLDA2Q53GA4 152 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 C9orf57Q5W0N0 161 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 PM20D1Q6GTS8 502 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CAPRIN2Q6IMN6 1127 aaKnown RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 ABRAXAS1Q6UWZ7 409 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 DLEU7Q6UYE1 221 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CPEB2Q7Z5Q1 589 aaKnown RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 ADCK1Q86TW2 530 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 ASPGQ86U10 573 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 NFE4Q86UQ8 179 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 SPATA2LQ8IUW3 424 aaPredicted RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 RCOR2Q8IZ40 523 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 LGI2Q8N0V4 545 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 BATF2Q8N1L9 274 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 KDM8Q8N371 416 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 SIDT2Q8NBJ9 832 aaKnown RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CLEC1AQ8NC01 280 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 ANKRD20A12PQ8NF67 263 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 OR52E1Q8NGJ3 308 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 C4orf45Q96LM5 186 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 RUNDC3BQ96NL0 473 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 IL17FQ96PD4 163 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 FAM111AQ96PZ2 611 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 DDX50Q9BQ39 737 aaKnown RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 POLR3CQ9BUI4 534 aaPredicted RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 TEX13AQ9BXU3 409 aaPredicted RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 NYXQ9GZU5 481 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 ABCG4Q9H172 646 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 KCNMB3Q9NPA1 279 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 A4GALTQ9NPC4 353 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 EXOC1Q9NV70 894 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 KCNN3Q9UGI6 736 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 IL36AQ9UHA7 158 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 CCPG1Q9ULG6 757 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 RUVBL2Q9Y230 463 aaKnown RBP3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 EXOC6BQ9Y2D4 811 aa3.04□□□□□ -1.92
RNU6-840P-201ENST00000517275 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 TRBV5-5A0A0J9YX44 114 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 MAGEB16A2A368 324 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 ANKRD61A6NGH8 418 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 MYMKA6NI61 221 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 SLC28A1O00337 649 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF197O14709 1029 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 SOCS5O75159 536 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 GLRA3O75311 464 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 DFFBO76075 338 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 SLC4A1P02730 911 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 ACAA1P09110 424 aaPredicted RBP3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 STAG3L1P0CL83 205 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 PAX1P15863 534 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 DESP17661 470 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 ARF4P18085 180 aaPredicted RBP3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 SCP2P22307 547 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 CCND2P30279 289 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 SFNP31947 248 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 CSTF2P33240 577 aaKnown RBP eCLIP3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 IL15P40933 162 aaPredicted RBP3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 RABIFP47224 123 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 ART1P52961 327 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 LINC00205P59089 165 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 HERV-K104P61576 105 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 PDK1Q15118 436 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 MAPK11Q15759 364 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 PDSS1Q5T2R2 415 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 UGT3A1Q6NUS8 523 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 TTC27Q6P3X3 843 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF852Q6ZMS4 543 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 RBM43Q6ZSC3 357 aaKnown RBP3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 C16orf82Q7Z2V1 217 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 TMEM126BQ8IUX1 230 aa3.03□□□□□ -1.92
RNU6-840P-201ENST00000517275 TDHQ8IZJ6 230 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms