RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 EDNRBP24530 442 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 ITGB7P26010 798 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 AGTR2P50052 363 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CLDN20P56880 219 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 RHAGQ02094 409 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 VEPH1Q14D04 833 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 LARS2Q15031 903 aaKnown RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 MED22Q15528 200 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 NOMO2Q5JPE7 1267 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CLLU1Q5K131 121 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 SPANXN4Q5MJ08 99 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 GPR153Q6NV75 609 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 BRAT1Q6PJG6 821 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 ARSKQ6UWY0 536 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CLEC20AQ6ZU45 233 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 EIF3MQ7L2H7 374 aaKnown RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 ADGRG3Q86Y34 549 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 GPSM1Q86YR5 675 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 LINC00518Q8N0U6 118 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CLDN22Q8N7P3 220 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 C19orf18Q8NEA5 215 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF680Q8NEM1 530 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 NLGN4YQ8NFZ3 816 aaPredicted RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 OR8K5Q8NH50 307 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 BCL7CQ8WUZ0 217 aaPredicted RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 SAMD11Q96NU1 681 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 FERD3LQ96RJ6 166 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 RANBP3Q9H6Z4 567 aaPredicted RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CATSPERZQ9NTU4 200 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 TMEM39AQ9NV64 488 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 UBQLN1Q9UMX0 589 aaKnown RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF236Q9UL36 1845 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 SHROOM3Q8TF72 1996 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 WASHC1A8K0Z3 465 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CDC7O00311 574 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 BTN3A1O00481 513 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 TNFRSF21O75509 655 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 C22orf31O95567 290 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CSF2P04141 144 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 TSPAN19P0C672 248 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 RPS3P23396 243 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 PSMA1P25786 263 aaKnown RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 PTBP1P26599 531 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 SOX9P48436 509 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 RENBPP51606 427 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 STC1P52823 247 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 BACE1P56817 501 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 POLR2GP62487 172 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF33BQ06732 778 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 AANATQ16613 207 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 HKDC1Q2TB90 917 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 TYW3Q6IPR3 259 aaKnown RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 FAM9CQ8IZT9 166 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 OR8H3Q8N146 312 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CAMKK1Q8N5S9 505 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 DTX3Q8N9I9 347 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 TRAPPC12Q8WVT3 735 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 AKAP1Q92667 903 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 MSANTD3Q96H12 275 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 TBATAQ96M53 351 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 MYOCQ99972 504 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 MARVELD1Q9BSK0 173 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 ERVMER34-1Q9H9K5 563 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 UCKL1Q9NWZ5 548 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 CD274Q9NZQ7 290 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 EIF2B4Q9UI10 523 aaKnown RBP12.42□□□□□ -0.42
SMAD1-215ENST00000515385 POFUT2Q9Y2G5 429 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 PCDHGB7Q9Y5F8 929 aa12.42□□□□□ -0.42
SMAD1-215ENST00000515385 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 MIA3Q5JRA6 1907 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 A0A1B0GVM2 712 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 NPEPPSL1A6NEC2 478 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 OR51F1A6NGY5 319 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 A8MVJ9 347 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 PIRO00625 290 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 LDB2O43679 373 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 OTCP00480 354 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 IL1AP01583 271 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 TPOP07202 933 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 HMBSP08397 361 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 PIPP12273 146 aaPredicted RBP12.41□□□□□ -0.42
SMAD1-215ENST00000515385 ANXA8P13928 327 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 HLA-FP30511 346 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 HMGCLP35914 325 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 HTR6P50406 440 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 RPL38P63173 70 aaKnown RBP12.41□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF267Q14586 743 aaPredicted RBP12.41□□□□□ -0.42
SMAD1-215ENST00000515385 PCBP2Q15366 365 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMAD1-215ENST00000515385 GRK1Q15835 563 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 SSX1Q16384 188 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 PYDC2Q56P42 97 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 AFMIDQ63HM1 303 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 CATSPERGQ6ZRH7 1159 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 CBLL1Q75N03 491 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 GPAT4Q86UL3 456 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 COMMD7Q86VX2 200 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 RNF34Q969K3 372 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 OPALINQ96PE5 141 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms