RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 B3GLCTQ6Y288 498 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 BPHLQ86WA6 291 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 LACC1Q8IV20 430 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 CHPFQ8IZ52 775 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 MDGA1Q8NFP4 955 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 KBTBD8Q8NFY9 601 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 KCTD13Q8WZ19 329 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 MSANTD3Q96H12 275 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SERPINB11Q96P15 392 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 FAM193BQ96PV7 902 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 COPS8Q99627 209 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 C11orf54Q9H0W9 315 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 BEX1Q9HBH7 125 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 DNAJC27Q9NZQ0 273 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TMPRSS11EQ9UL52 423 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PCDHB5Q9Y5E4 795 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PPP2R3BQ9Y5P8 575 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 PEX16Q9Y5Y5 336 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 COL1A2P08123 1366 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 LCHNA4D1U4 455 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 CBX4O00257 560 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ARHGEF9O43307 516 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 RAMP2O60895 175 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TSPAN9O75954 239 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SLITRK5O94991 958 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 CDRT1O95170 752 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 STAU1O95793 577 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 DNAJB2P25686 324 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 TBX4P57082 545 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SPIBQ01892 262 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 VEPH1Q14D04 833 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 UGT8Q16880 541 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 COQ5Q5HYK3 327 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 MSANTD2Q6P1R3 559 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SLC46A3Q7Z3Q1 461 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 GPR149Q86SP6 731 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 CELF5Q8N6W0 485 aaKnown RBP7.39□□□□□ -1.23
NEDD9-208ENST00000504387 KLHDC9Q8NEP7 349 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 B3GNT7Q8NFL0 401 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 OR10T2Q8NGX3 314 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 ARRDC2Q8TBH0 407 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SELENOMQ8WWX9 145 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 CIPCQ9C0C6 399 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 CRISPLD1Q9H336 500 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 SPASTQ9UBP0 616 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 NEU3Q9UQ49 428 aa7.39□□□□□ -1.23
NEDD9-208ENST00000504387 HHLA1C9JL84 531 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CLIC1O00299 241 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 STX7O15400 261 aaKnown RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 FFAR2O15552 330 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CACNG3O60359 315 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 PRAMEF12O95522 483 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 ALPIP09923 528 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CYP2A6P11509 494 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF250P15622 560 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 ITPKAP23677 461 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 DNAJA1P31689 397 aaKnown RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CHRNEQ04844 493 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 POU4F3Q15319 338 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 ZMYND11Q15326 602 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 SLC14A2Q15849 920 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 DGKKQ5KSL6 1271 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 KDM4DQ6B0I6 523 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 FBXL22Q6P050 247 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 SNX20Q7Z614 316 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 TSPYL5Q86VY4 417 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 DENND1CQ8IV53 801 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 IQCF2Q8IXL9 164 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 TMEM132CQ8N3T6 1108 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 DPP10Q8N608 796 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 TTC9BQ8N6N2 239 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 LMNTD1Q8N9Z9 388 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 SYT14Q8NB59 555 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 OR8J3Q8NGG0 315 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 RHEBL1Q8TAI7 183 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 RDH12Q96NR8 316 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 SNX18Q96RF0 628 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 BARHL1Q9BZE3 327 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 DERL2Q9GZP9 239 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CLPBQ9H078 707 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 ATG10Q9H0Y0 220 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 SMURF1Q9HCE7 757 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 ELOVL2Q9NXB9 296 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 NDRG4Q9ULP0 352 aaKnown RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CLEC4AQ9UMR7 237 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 DERAQ9Y315 318 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 NAALAD2Q9Y3Q0 740 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CCDC88CQ9P219 2028 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 SSC5DA1L4H1 1573 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 LOC102723532A0A0G2JNH3 316 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 GSAPA4D1B5 854 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 MYADML2A6NDP7 307 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 FABP12A6NFH5 140 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CLDN24A6NM45 220 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 IFRD1O00458 451 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-208ENST00000504387 CDK2AP1O14519 115 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 PLD2O14939 933 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 RGS14O43566 566 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 OR2B3O76000 313 aa7.38□□□□□ -1.23
NEDD9-208ENST00000504387 PEX11BO96011 259 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms