RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ZKSCAN8Q15776 578 aaPredicted RBP21.56■■□□□ 1.04
SNIP1-203ENST00000493916 GLE1Q53GS7 698 aaKnown RBP21.56■■□□□ 1.04
SNIP1-203ENST00000493916 CEP128Q6ZU80 1094 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 PLD3Q8IV08 490 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 ABHD11Q8NFV4 315 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 ALKBH8Q96BT7 664 aaKnown RBP21.56■■□□□ 1.04
SNIP1-203ENST00000493916 PYCR2Q96C36 320 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 OR4K3Q96R72 315 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 SPSB2Q99619 263 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 ZNF71Q9NQZ8 489 aaPredicted RBP21.56■■□□□ 1.04
SNIP1-203ENST00000493916 CTNNAL1Q9UBT7 734 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 CTSFQ9UBX1 484 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 TP53TG5Q9Y2B4 290 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 MAU2Q9Y6X3 613 aa21.56■■□□□ 1.04
SNIP1-203ENST00000493916 VSTM2BA6NLU5 285 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 P2RX6O15547 441 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 IGHEP01854 428 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 CDH1P12830 882 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 STMN1P16949 149 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 FOXL2P58012 376 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 CHAF1BQ13112 559 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 TSNQ15631 228 aaKnown RBP21.55■■□□□ 1.04
SNIP1-203ENST00000493916 VN1R4Q7Z5H5 301 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 PPP1R32Q7Z5V6 425 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 RELL1Q8IUW5 271 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 PPM1NQ8N819 430 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 MTRF1LQ9UGC7 380 aaKnown RBP21.55■■□□□ 1.04
SNIP1-203ENST00000493916 DMGDHQ9UI17 866 aaKnown RBP21.55■■□□□ 1.04
SNIP1-203ENST00000493916 CDC14AQ9UNH5 594 aa21.55■■□□□ 1.04
SNIP1-203ENST00000493916 PCDHGA9Q9Y5G4 932 aaKnown RBP21.55■■□□□ 1.04
SNIP1-203ENST00000493916 PRPF4O43172 522 aaKnown RBP eCLIP21.54■■□□□ 1.04
SNIP1-203ENST00000493916 SUV39H1O43463 412 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 CEACAM4O75871 244 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 ANXA5P08758 320 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 HNMTP50135 292 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 CCR8P51685 355 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 RAB10P61026 200 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 DSG2Q14126 1118 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 OR4K1Q8NGD4 311 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 COL26A1Q96A83 441 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 SARGQ9BW04 601 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 DRC3Q9H069 523 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 TSPYL1Q9H0U9 437 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 MLXIPLQ9NP71 852 aa21.54■■□□□ 1.04
SNIP1-203ENST00000493916 FASNP49327 2511 aaKnown RBP21.54■■□□□ 1.04
SNIP1-203ENST00000493916 SPTA1P02549 2419 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 IGLV3-12A0A075B6K2 115 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 PEX12O00623 359 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 PHGDHO43175 533 aaKnown RBP21.53■■□□□ 1.04
SNIP1-203ENST00000493916 SLC28A2O43868 658 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 CCDC166P0CW27 439 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 FBLP22087 321 aaKnown RBP21.53■■□□□ 1.04
SNIP1-203ENST00000493916 MMP11P24347 488 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 GRK3P35626 688 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 BCL6P41182 706 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 ATP6V0D1P61421 351 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 FAM53BQ14153 422 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 EFTUD2Q15029 972 aaKnown RBP eCLIP21.53■■□□□ 1.04
SNIP1-203ENST00000493916 NDUFA9Q16795 377 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 FRA10AC1Q70Z53 315 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 TMEM151BQ8IW70 566 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 FER1L6-AS2Q96M78 137 aa21.53■■□□□ 1.04
SNIP1-203ENST00000493916 ZNF282Q9UDV7 671 aaPredicted RBP21.53■■□□□ 1.04
SNIP1-203ENST00000493916 K7EM74 188 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 FOXS1O43638 330 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 FAM155BO75949 473 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 SLC26A3P40879 764 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 CCL11P51671 97 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 OCA2Q04671 838 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 ASB18Q6ZVZ8 466 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 PRICKLE2Q7Z3G6 844 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 PTRH1Q86Y79 214 aaKnown RBP21.52■■□□□ 1.04
SNIP1-203ENST00000493916 KLHDC8AQ8IYD2 350 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 MFSD9Q8NBP5 474 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 STT3BQ8TCJ2 826 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 SLC5A11Q8WWX8 675 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 TM4SF19Q96DZ7 209 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 UBXN10Q96LJ8 280 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 EGFL8Q99944 293 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 SLC25A23Q9BV35 468 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 SOX17Q9H6I2 414 aaPredicted RBP21.52■■□□□ 1.04
SNIP1-203ENST00000493916 SEMA3GQ9NS98 782 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 P4HTMQ9NXG6 502 aa21.52■■□□□ 1.04
SNIP1-203ENST00000493916 MDC1Q14676 2089 aaKnown RBP21.51■■□□□ 1.03
SNIP1-203ENST00000493916 FEZF1A0PJY2 475 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 CD1DP15813 335 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 NR1D1P20393 614 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 PHBP35232 272 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 PGDP52209 483 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 TGFBIQ15582 683 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 CDKL4Q5MAI5 379 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 DCAF10Q5QP82 559 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 TMEM214Q6NUQ4 689 aaKnown RBP21.51■■□□□ 1.03
SNIP1-203ENST00000493916 ATG14Q6ZNE5 492 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 THOC6Q86W42 341 aaKnown RBP21.51■■□□□ 1.03
SNIP1-203ENST00000493916 CEP112Q8N8E3 955 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 AMER3Q8N944 861 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 CAMKVQ8NCB2 501 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 NEIL2Q969S2 332 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 MIEF2Q96C03 454 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms