RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TOP3AQ13472 1001 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 IL18R1Q13478 541 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 E2F2Q14209 437 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 DHCR24Q15392 516 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 SF1Q15637 639 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 CTU2Q2VPK5 515 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 ZNF691Q5VV52 312 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 XAF1Q6GPH4 301 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 PTOV1Q86YD1 416 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 C1orf52Q8N6N3 182 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 ZNF366Q8N895 744 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 CDC26Q8NHZ8 85 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 DCUN1D5Q9BTE7 237 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 DUSP26Q9BV47 211 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 EPHX3Q9H6B9 360 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 TM9SF3Q9HD45 589 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 ETAA1Q9NY74 926 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 BLOC1S6Q9UL45 172 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 MAPRE3Q9UPY8 281 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 PCDHB11Q9Y5F2 797 aa17.37■□□□□ 0.37
PDLIM7-207ENST00000486828 XYLBO75191 536 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 SEC14L2O76054 403 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 ITGAMP11215 1152 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 GSTM2P28161 218 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 PDHA2P29803 388 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 PBLDP30039 288 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 KDELR2P33947 212 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 EMP3P54852 163 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 ISL1P61371 349 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 TUBA3CQ13748 450 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 ZNF658BQ4V348 819 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 OR2T5Q6IEZ7 315 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 CAMKMTQ7Z624 323 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 NLRP8Q86W28 1048 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 OR7G3Q8NG95 312 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 OR2T29Q8NH02 315 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 WFIKKN2Q8TEU8 576 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 CHTF18Q8WVB6 975 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 POF1BQ8WVV4 589 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 SH3KBP1Q96B97 665 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 DTD2Q96FN9 168 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 NAA50Q9GZZ1 169 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 CXXC1Q9P0U4 656 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 BTNL2Q9UIR0 455 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 ABCG2Q9UNQ0 655 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 BTBD3Q9Y2F9 522 aa17.36■□□□□ 0.37
PDLIM7-207ENST00000486828 ANKRD33BA6NCL7 494 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 H3BM21 787 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 NOL3O60936 208 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 CYP17A1P05093 508 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 HNRNPA1P09651 372 aaKnown RBP eCLIP17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 EPCAMP16422 314 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 RYKP34925 604 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 CTNNB1P35222 781 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 BMPR1AP36894 532 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 PNLIPRP1P54315 467 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 SPIN4Q56A73 249 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 ADNP2Q6IQ32 1131 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 LAIR2Q6ISS4 152 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 ANKRD26P1Q6NSI1 321 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 GRASPQ7Z6J2 395 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 SPARTQ8N0X7 666 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 CPA6Q8N4T0 437 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 FBXO15Q8NCQ5 510 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 HUS1BQ8NHY5 278 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 ING5Q8WYH8 240 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 NRBF2Q96F24 287 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 COQ10AQ96MF6 247 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 PHF12Q96QT6 1004 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 WRAP53Q9BUR4 548 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 SPATA9Q9BWV2 254 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 KCNE2Q9Y6J6 123 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 GABRR3A8MPY1 467 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 KPNA3O00505 521 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 C1orf105O95561 183 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 FABP3P05413 133 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 ANXA4P09525 319 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 ADH5P11766 374 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 CEBPBP17676 345 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 MATN1P21941 496 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 IGFBP5P24593 272 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 RPS6KA3P51812 740 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 TMBIM6P55061 237 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 ST8SIA6P61647 398 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 VEZF1Q14119 521 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 BCL7AQ4VC05 210 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 CPTPQ5TA50 214 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 SLCO4C1Q6ZQN7 724 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 CBLL1Q75N03 491 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 EIF3MQ7L2H7 374 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 SYNPOQ8N3V7 929 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 RNF217Q8TC41 542 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 NEIL2Q969S2 332 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 MAGED4Q96JG8 741 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 TPT1P8Q9HAU6 139 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 GULP1Q9UBP9 304 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 GMEB1Q9Y692 573 aa17.35■□□□□ 0.37
PDLIM7-207ENST00000486828 BCKDKO14874 412 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 SPINT1O43278 529 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 HPCAL1P37235 193 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms