RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LCMT2O60294 686 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 IL6P05231 212 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 MAT2AP31153 395 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SOX18P35713 384 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 ARFIP1P53367 373 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 RELAQ04206 551 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 NR6A1Q15406 480 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PRAMEF14Q5SWL7 426 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PRAMEF13Q5VWM6 474 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CWF19L1Q69YN2 538 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 WDR92Q96MX6 357 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 EPS8L2Q9H6S3 715 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CCDC177Q9NQR7 707 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 BAIAP2L1Q9UHR4 511 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PCDHGA11Q9Y5H2 935 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3DA0A087WVF3 549 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3IA0A087WXS9 549 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3EA0A087X179 549 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3KA0A087X1G2 549 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3FA6NER0 549 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3LB9A6J9 549 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PRAMEF26H0Y7S4 382 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 LMNAP02545 664 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PGRP06401 933 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3HP0C7X1 549 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SMIM10L1P0DMW3 83 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 IDSP22304 550 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 RPL10P27635 214 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CD6P30203 668 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 NUDT1P36639 197 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 RAB28P51157 221 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SRP54P61011 504 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PRKG2Q13237 762 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CEBPEQ15744 281 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SPANXN4Q5MJ08 99 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3GQ6DHY5 549 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3CQ6IPX1 549 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PRMT9Q6P2P2 845 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TBC1D3Q8IZP1 549 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 FBXL6Q8N531 539 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CADM4Q8NFZ8 388 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TOE1Q96GM8 510 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SMIM10Q96HG1 83 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 HAUS8Q9BT25 410 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TRIM8Q9BZR9 551 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TMEM168Q9H0V1 697 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 KAT8Q9H7Z6 458 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CARS2Q9HA77 564 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 EVA1BQ9NVM1 165 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 ARMC1Q9NVT9 282 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SPHK1Q9NYA1 384 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 LEF1Q9UJU2 399 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CROTQ9UKG9 612 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PACSIN3Q9UKS6 424 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PSMD13Q9UNM6 376 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 A0A0A6YYD5 115 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 OR52A4PA6NMU1 304 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PLPP1O14494 284 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PI15O43692 258 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PRSS23O95084 383 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SCELO95171 688 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 MAP4P27816 1152 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 HTR1EP28566 365 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 HMOX2P30519 316 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SLC34A1Q06495 639 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PRDX1Q06830 199 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SGCGQ13326 291 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 RABL3Q5HYI8 236 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 HID1Q8IV36 788 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 ZNF548Q8NEK5 533 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 SELENOMQ8WWX9 145 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 MTFMTQ96DP5 389 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 PCDHAC1Q9H158 963 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 TRIT1Q9H3H1 467 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CD320Q9NPF0 282 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 ZNF639Q9UID6 485 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 KCNK6Q9Y257 313 aa11.64□□□□□ -0.55
PRPF39-203ENST00000477626 CFAP20Q9Y6A4 193 aaKnown RBP11.64□□□□□ -0.55
PRPF39-203ENST00000477626 E9PQ18 207 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 CLGNO14967 610 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 SCAMP2O15127 329 aaKnown RBP11.63□□□□□ -0.55
PRPF39-203ENST00000477626 ABCB1P08183 1280 aaPredicted RBP11.63□□□□□ -0.55
PRPF39-203ENST00000477626 CDH1P12830 882 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 ME2P23368 584 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 OXTRP30559 389 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 EEFSECP57772 596 aaKnown RBP11.63□□□□□ -0.55
PRPF39-203ENST00000477626 CAPRIN1Q14444 709 aaKnown RBP11.63□□□□□ -0.55
PRPF39-203ENST00000477626 SLBPQ14493 270 aaKnown RBP eCLIP11.63□□□□□ -0.55
PRPF39-203ENST00000477626 RCN1Q15293 331 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 CHST15Q7LFX5 561 aaPredicted RBP11.63□□□□□ -0.55
PRPF39-203ENST00000477626 SFTPA2Q8IWL1 248 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 MAML2Q8IZL2 1156 aaPredicted RBP11.63□□□□□ -0.55
PRPF39-203ENST00000477626 PSMA8Q8TAA3 256 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 SLC13A3Q8WWT9 602 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 FOPNLQ96NB1 174 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 ZNF570Q96NI8 536 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 ANKRD27Q96NW4 1050 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 FOXQ1Q9C009 403 aa11.63□□□□□ -0.55
PRPF39-203ENST00000477626 LMAN1LQ9HAT1 526 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms