RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SSX9Q7RTT3 188 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 ZER1Q7Z7L7 766 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 OR6M1Q8NGM8 313 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 MYEOVQ96EZ4 313 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 MRPL48Q96GC5 212 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 ESRP2Q9H6T0 727 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 CHRAC1Q9NRG0 131 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 THUMPD1Q9NXG2 353 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 BFARQ9NZS9 450 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 POM121BA6NF01 834 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 RPS17P08708 135 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 SEC13P55735 322 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 RFX4Q33E94 735 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 ZIK1Q3SY52 487 aaPredicted RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 PIGGQ5H8A4 983 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 TEDDM1Q5T9Z0 273 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 NCBP2-AS2Q69YL0 99 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 TRMT10BQ6PF06 316 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 PGBD3Q8N328 593 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 SRFBP1Q8NEF9 429 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 METTL6Q8TCB7 284 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 MAGEE2Q8TD90 523 aaPredicted RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 RBPMSQ93062 196 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 MOCOSQ96EN8 888 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 MFSD3Q96ES6 412 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 NARS2Q96I59 477 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 KLHL15Q96M94 604 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 RAD9AQ99638 391 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 TFB2MQ9H5Q4 396 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 ZNF624Q9P2J8 865 aaPredicted RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 RPS6KA6Q9UK32 745 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 FBXW11Q9UKB1 542 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 FZD10Q9ULW2 581 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 PIAS3Q9Y6X2 628 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 OR51F1A6NGY5 319 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 C2orf74A8MZ97 194 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 ANGPT2O15123 496 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 IRAK2O43187 625 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 EIF1BO60739 113 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 POP7O75817 140 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 CSH1P0DML2 217 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 CSH2P0DML3 217 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 EIF1P41567 113 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 STK19P49842 368 aaPredicted RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 TRAF3Q13114 568 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 CTBP1Q13363 440 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 CTF1Q16619 201 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 TMEM240Q5SV17 173 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 PDE12Q6L8Q7 609 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 CD300LGQ6UXG3 332 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 RASSF6Q6ZTQ3 369 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 ZNF567Q8N184 647 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 CLRN3Q8NCR9 226 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 SH3RF2Q8TEC5 729 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 TUBGCP3Q96CW5 907 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 TRIM62Q9BVG3 475 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 VN1R3Q9BXE9 311 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 MMP28Q9H239 520 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 CAB39LQ9H9S4 337 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 ZNF334Q9HCZ1 680 aaPredicted RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 MSRAQ9UJ68 235 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 CNOT6Q9ULM6 557 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 CNTN6Q9UQ52 1028 aa9.66□□□□□ -0.86
NUP50-214ENST00000469163 CNOT1A5YKK6 2376 aaKnown RBP9.66□□□□□ -0.86
NUP50-214ENST00000469163 DBX1A6NMT0 343 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 KLF11O14901 512 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 WDPCPO95876 746 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 MT-CO1P00395 513 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 ACADLP28330 430 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 PREPP48147 710 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 RHOAP61586 193 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 ZNF91Q05481 1191 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 FGL2Q14314 439 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 FLYWCH1Q4VC44 716 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 KLHL26Q53HC5 615 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 DGKKQ5KSL6 1271 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 XAF1Q6GPH4 301 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 BHLHB9Q6PI77 547 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 XKRXQ6PP77 449 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 PAMR1Q6UXH9 720 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 PPIL6Q8IXY8 311 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 YAF2Q8IY57 180 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 OR6S1Q8NH40 331 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 CPT1BQ92523 772 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 NPY6RQ99463 290 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 GDF15Q99988 308 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 PBX4Q9BYU1 374 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 PCDHB9Q9Y5E1 797 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 GPR179Q6PRD1 2367 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 TBC1D3BA6NDS4 549 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 NCF1BA6NI72 391 aaPredicted RBP9.65□□□□□ -0.86
NUP50-214ENST00000469163 NCF1CA8MVU1 366 aaPredicted RBP9.65□□□□□ -0.86
NUP50-214ENST00000469163 GPR39O43194 453 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 LY86O95711 162 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 IL6P05231 212 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 KLK3P07288 261 aaPredicted RBP9.65□□□□□ -0.86
NUP50-214ENST00000469163 HBQ1P09105 142 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 RALBP11234 206 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 NR2C1P13056 603 aa9.65□□□□□ -0.86
NUP50-214ENST00000469163 NCF1P14598 390 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms