RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 NPLOC4Q8TAT6 608 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 HASPINQ8TF76 798 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CDCA5Q96FF9 252 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 RNF170Q96K19 258 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 RIPOR3Q96MK2 946 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 WDFY2Q96P53 400 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 TSSK3Q96PN8 268 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 KCNC2Q96PR1 638 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SMIM14Q96QK8 99 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 PHOX2BQ99453 314 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 TTPALQ9BTX7 342 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CLPBQ9H078 707 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 RNF167Q9H6Y7 350 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ITM2CQ9NQX7 267 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ADPRHL2Q9NX46 363 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ZNF226Q9NYT6 803 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CNOT2Q9NZN8 540 aaKnown RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 IL17CQ9P0M4 197 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 COLQQ9Y215 455 aaPredicted RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 PCDHB5Q9Y5E4 795 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 KCNE1BA0A087WTH5 132 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 A0A0D9SEW6 157 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 SH3D21A4FU49 640 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 MAGEB17A8MXT2 336 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 FPGTO14772 594 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 ADAMDEC1O15204 470 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 STK16O75716 305 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 PDYNP01213 254 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 YES1P07947 543 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 OR4Q2P0C623 313 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 GDF5P43026 501 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 RFX2P48378 723 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 GPR15P49685 360 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 CDH4P55283 916 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 C21orf58P58505 322 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 C19orf57Q0VDD7 668 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 ST3GAL4Q11206 333 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 YIF1BQ5BJH7 314 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 FAM209AQ5JX71 171 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 C10orf120Q5SQS8 335 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 SDHAF4Q5VUM1 108 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 PPP2R2DQ66LE6 453 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 PDE12Q6L8Q7 609 aaKnown RBP7.06□□□□□ -1.28
USP48-206ENST00000464577 GDPGP1Q6ZNW5 385 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 LRRC70Q7Z2Q7 622 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 PLEKHH3Q7Z736 793 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 ATCAYQ86WG3 371 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 MIB1Q86YT6 1006 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 RBFAQ8N0V3 343 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 ZBTB2Q8N680 514 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 FAM181AQ8N9Y4 354 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 PSD4Q8NDX1 1056 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 KLHDC9Q8NEP7 349 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 OR4C15Q8NGM1 316 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 ANGPTL6Q8NI99 470 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 LKAAEAR1Q8TD35 194 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 CSGALNACT1Q8TDX6 532 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 MED30Q96HR3 178 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 TRNT1Q96Q11 434 aaKnown RBP7.06□□□□□ -1.28
USP48-206ENST00000464577 C19orf43Q9BQ61 176 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 TMEM246Q9BRR3 403 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 APOL5Q9BWW9 433 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 TAPBPLQ9BX59 468 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 CIPCQ9C0C6 399 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 RACGAP1Q9H0H5 632 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 CHST8Q9H2A9 424 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 BPIFA1Q9NP55 256 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 TLR8Q9NR97 1041 aaKnown RBP7.06□□□□□ -1.28
USP48-206ENST00000464577 RAD18Q9NS91 495 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 C14orf119Q9NWQ9 140 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 FAM120CQ9NX05 1096 aaKnown RBP7.06□□□□□ -1.28
USP48-206ENST00000464577 GPR83Q9NYM4 423 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 CPA4Q9UI42 421 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 TSR3Q9UJK0 312 aaKnown RBP7.06□□□□□ -1.28
USP48-206ENST00000464577 ACTL7AQ9Y615 435 aa7.06□□□□□ -1.28
USP48-206ENST00000464577 TRIP12Q14669 1992 aaPredicted RBP7.06□□□□□ -1.28
USP48-206ENST00000464577 H3BNC9 293 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TNFRSF11BO00300 401 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 PDHXO00330 501 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 CCRL2O00421 344 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TPD52L2O43399 206 aaKnown RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 SUV39H1O43463 412 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SCN2BO60939 215 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 OAZ2O95190 189 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TBX18O95935 607 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 B3GALT4O96024 378 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 DNTTP04053 509 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ITGB1P05556 798 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 HMBSP08397 361 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 PIPP12273 146 aaPredicted RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 EPORP19235 508 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 CYP2A7P20853 494 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ENDOUP21128 410 aaKnown RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 PPIBP23284 216 aaKnown RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 TACR1P25103 407 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 RRM2P31350 389 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TNFSF8P32971 234 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 PCGF2P35227 344 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 WNT3P56703 355 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 RACK1P63244 317 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms