RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 KRT12Q99456 494 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 OLFM1Q99784 485 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 CRB3Q9BUF7 120 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 TRIM31Q9BZY9 425 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 ABCF3Q9NUQ8 709 aa18.44■□□□□ 0.54
USP40-207ENST00000450940 HIST1H2AGP0C0S8 130 aaPredicted RBP18.43■□□□□ 0.54
USP40-207ENST00000450940 NPPBP16860 134 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 HIST1H2ADP20671 130 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 AP1S2P56377 157 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 CSNK1G2P78368 415 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 PDIA2Q13087 525 aaKnown RBP18.43■□□□□ 0.54
USP40-207ENST00000450940 NAE1Q13564 534 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 FASTKD3Q14CZ7 662 aaKnown RBP18.43■□□□□ 0.54
USP40-207ENST00000450940 INPP5JQ15735 1006 aaPredicted RBP18.43■□□□□ 0.54
USP40-207ENST00000450940 TUBB8Q3ZCM7 444 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 PLEKHN1Q494U1 663 aaPredicted RBP18.43■□□□□ 0.54
USP40-207ENST00000450940 DUPD1Q68J44 220 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 IGFL2Q6UWQ7 119 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 ADCK2Q7Z695 626 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 LAPTM4BQ86VI4 370 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 ANKMY2Q8IV38 441 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 GPATCH11Q8N954 259 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 BBOF1Q8ND07 529 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 FBXO36Q8NEA4 188 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 ANKRD7Q92527 254 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 TM4SF19Q96DZ7 209 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 HIST1H2AHQ96KK5 128 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 HIST1H2AJQ99878 128 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 MCMBPQ9BTE3 642 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 H2AFJQ9BTM1 129 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 MFRPQ9BY79 579 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 DRC3Q9H069 523 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 ATG10Q9H0Y0 220 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 MKKSQ9NPJ1 570 aaPredicted RBP18.43■□□□□ 0.54
USP40-207ENST00000450940 C14orf105Q9NVL8 296 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 ZFATQ9P243 1243 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 TRPC4Q9UBN4 977 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 SH2B3Q9UQQ2 575 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 SNX24Q9Y343 169 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 PSAT1Q9Y617 370 aa18.43■□□□□ 0.54
USP40-207ENST00000450940 DOPEY2Q9Y3R5 2298 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 FAM187AA6NFU0 413 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 ENO2P09104 434 aaPredicted RBP18.42■□□□□ 0.54
USP40-207ENST00000450940 VARSP26640 1264 aaKnown RBP18.42■□□□□ 0.54
USP40-207ENST00000450940 PGGT1BP53609 377 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 SRSF1Q07955 248 aaKnown RBP eCLIP18.42■□□□□ 0.54
USP40-207ENST00000450940 UBAP2LQ14157 1087 aaKnown RBP18.42■□□□□ 0.54
USP40-207ENST00000450940 TMEM207Q6UWW9 146 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 SLC26A11Q86WA9 606 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 ZC3HC1Q86WB0 502 aaKnown RBP18.42■□□□□ 0.54
USP40-207ENST00000450940 C17orf64Q86WR6 236 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 EFCAB3Q8N7B9 438 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 SPATA4Q8NEY3 305 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 ABHD11Q8NFV4 315 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 OR4K1Q8NGD4 311 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 OR56A3Q8NH54 315 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 TM9SF4Q92544 642 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 MMABQ96EY8 250 aaPredicted RBP18.42■□□□□ 0.54
USP40-207ENST00000450940 MESP1Q9BRJ9 268 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 ERP44Q9BS26 406 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 SARGQ9BW04 601 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 FAM129AQ9BZQ8 928 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 SLAMF7Q9NQ25 335 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 C3orf18Q9UK00 162 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 NOVA2Q9UNW9 492 aaKnown RBP18.42■□□□□ 0.54
USP40-207ENST00000450940 B3GNT3Q9Y2A9 372 aa18.42■□□□□ 0.54
USP40-207ENST00000450940 USP9XQ93008 2570 aaPredicted RBP18.42■□□□□ 0.54
USP40-207ENST00000450940 A0A0A6YYC8 382 aaPredicted RBP18.41■□□□□ 0.54
USP40-207ENST00000450940 H0YIG0 161 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 I3L1I5 382 aaPredicted RBP18.41■□□□□ 0.54
USP40-207ENST00000450940 PCDH17O14917 1159 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 HPP00738 406 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 ITGA3P26006 1051 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 EMP2P54851 167 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 SNRPNP63162 240 aaKnown RBP18.41■□□□□ 0.54
USP40-207ENST00000450940 Q0VFX4 171 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 ILF2Q12905 390 aaKnown RBP18.41■□□□□ 0.54
USP40-207ENST00000450940 NDUFA9Q16795 377 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 CRB2Q5IJ48 1285 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 CAPN13Q6MZZ7 669 aaPredicted RBP18.41■□□□□ 0.54
USP40-207ENST00000450940 SBSNQ6UWP8 590 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 Q6ZS92 163 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 FBXL8Q96CD0 374 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 HAUS8Q9BT25 410 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 TRIM54Q9BYV2 358 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 LHPPQ9H008 270 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 ZBTB20Q9HC78 741 aaPredicted RBP18.41■□□□□ 0.54
USP40-207ENST00000450940 ARL15Q9NXU5 204 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 WHRNQ9P202 907 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 MRPS2Q9Y399 296 aaKnown RBP18.41■□□□□ 0.54
USP40-207ENST00000450940 CNTRLQ7Z7A1 2325 aa18.41■□□□□ 0.54
USP40-207ENST00000450940 SCN3AQ9NY46 2000 aa18.4■□□□□ 0.54
USP40-207ENST00000450940 IDSB3KWA1 339 aa18.4■□□□□ 0.54
USP40-207ENST00000450940 LCMT2O60294 686 aaKnown RBP18.4■□□□□ 0.54
USP40-207ENST00000450940 ALOX12BO75342 701 aa18.4■□□□□ 0.54
USP40-207ENST00000450940 VPS4BO75351 444 aa18.4■□□□□ 0.54
USP40-207ENST00000450940 NSA2O95478 260 aaKnown RBP18.4■□□□□ 0.54
USP40-207ENST00000450940 ANXA5P08758 320 aa18.4■□□□□ 0.54
USP40-207ENST00000450940 ACPPP15309 386 aa18.4■□□□□ 0.54
USP40-207ENST00000450940 ZNF37AP17032 561 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms