RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 RECQL4O94761 1208 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SCELO95171 688 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 FABP3P05413 133 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 BMP1P13497 986 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 PTPRAP18433 802 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 RPL35P42766 123 aaKnown RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 DOC2BQ14184 412 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 GALEQ14376 348 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 GPR19Q15760 415 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF79Q15937 498 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 LIPKQ5VXJ0 399 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ANKRD54Q6NXT1 300 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ANKS3Q6ZW76 656 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 KCTD20Q7Z5Y7 419 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 CEP76Q8TAP6 659 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 EEF1AKMT1Q8WVE0 214 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 MAL2Q969L2 176 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ULK4Q96C45 1275 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 FCRL5Q96RD9 977 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 FEVQ99581 238 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 TM9SF2Q99805 663 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SPATA9Q9BWV2 254 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 BARHL1Q9BZE3 327 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SP110Q9HB58 689 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 C11orf16Q9NQ32 467 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 PDGFCQ9NRA1 345 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ZIM2Q9NZV7 527 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SPASTQ9UBP0 616 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 CLEC2DQ9UHP7 191 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SPATA2Q9UM82 520 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 CFL2Q9Y281 166 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 MRPS7Q9Y2R9 242 aaKnown RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 AP3M1Q9Y2T2 418 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 COL1A2P08123 1366 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ARPC4-TTLL3A0A0A6YYG9 625 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 POM121CA8CG34 1229 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ZBTB42B2RXF5 422 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 RFXAPO00287 272 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SIGLEC5O15389 551 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 FABP7O15540 132 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 VPS4BO75351 444 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 PDE9AO76083 593 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SLC34A2O95436 690 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 S100A6P06703 90 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 JUNDP17535 347 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 IL32P24001 234 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 PRIM2P49643 509 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 RAB8AP61006 207 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SIGLEC14Q08ET2 396 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 LRRC74AQ0VAA2 488 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 HYAL2Q12891 473 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 TARDBPQ13148 414 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 C5orf22Q49AR2 442 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 USP39Q53GS9 565 aaKnown RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 TYW3Q6IPR3 259 aaKnown RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 XRRA1Q6P2D8 792 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SHQ1Q6PI26 577 aaKnown RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 PAQR6Q6TCH4 344 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ARSKQ6UWY0 536 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 B3GLCTQ6Y288 498 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 CLEC20AQ6ZU45 233 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 BTN2A1Q7KYR7 527 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ZFP41Q8N8Y5 198 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 DPF3Q92784 378 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ISG20Q96AZ6 181 aaKnown RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 GIMAP5Q96F15 307 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ASB2Q96Q27 587 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 PSKH2Q96QS6 385 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 AIFM2Q9BRQ8 373 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 EBPLQ9BY08 206 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 RACGAP1Q9H0H5 632 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 HDHD2Q9H0R4 259 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 RNF39Q9H2S5 420 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 ABHD16BQ9H3Z7 469 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 BRD7Q9NPI1 651 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 SLC35C2Q9NQQ7 365 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 GPRC5BQ9NZH0 403 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 DNAJC27Q9NZQ0 273 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 CCDC59Q9P031 241 aaKnown RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 LUZP4Q9P127 313 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 YARS2Q9Y2Z4 477 aaKnown RBP7.3□□□□□ -1.24
HDAC9-214ENST00000441542 PCDHGB1Q9Y5G3 927 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 PCDHGA6Q9Y5G7 932 aa7.3□□□□□ -1.24
HDAC9-214ENST00000441542 MYBPHLA2RUH7 354 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 FADS2P1A8MWK0 482 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 ISM1B1AKI9 464 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 HAS3O00219 553 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 PSMD3O43242 534 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 CYP17A1P05093 508 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 ITGAMP11215 1152 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 HLA-DPA1P20036 260 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 ACVR2AP27037 513 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 KCNQ1P51787 676 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 CDH12P55289 794 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 RHAGQ02094 409 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 GALNT1Q10472 559 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-214ENST00000441542 DDX39BQ13838 428 aaKnown RBP7.29□□□□□ -1.24
HDAC9-214ENST00000441542 TTLL4Q14679 1199 aa7.29□□□□□ -1.24
HDAC9-214ENST00000441542 GANABQ14697 944 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms